ID A0A060VRH8_ONCMY Unreviewed; 1374 AA.
AC A0A060VRH8;
DT 03-SEP-2014, integrated into UniProtKB/TrEMBL.
DT 03-SEP-2014, sequence version 1.
DT 27-MAR-2024, entry version 32.
DE RecName: Full=Fibrillar collagen NC1 domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=GSONMT00071596001 {ECO:0000313|EMBL:CDQ57416.1};
OS Oncorhynchus mykiss (Rainbow trout) (Salmo gairdneri).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes;
OC Salmonidae; Salmoninae; Oncorhynchus.
OX NCBI_TaxID=8022 {ECO:0000313|EMBL:CDQ57416.1, ECO:0000313|Proteomes:UP000193380};
RN [1] {ECO:0000313|EMBL:CDQ57416.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=24755649; DOI=10.1038/ncomms4657;
RA Berthelot C., Brunet F., Chalopin D., Juanchich A., Bernard M., Noel B.,
RA Bento P., Da Silva C., Labadie K., Alberti A., Aury J.M., Louis A.,
RA Dehais P., Bardou P., Montfort J., Klopp C., Cabau C., Gaspin C.,
RA Thorgaard G.H., Boussaha M., Quillet E., Guyomard R., Galiana D., Bobe J.,
RA Volff J.N., Genet C., Wincker P., Jaillon O., Roest Crollius H.,
RA Guiguen Y.;
RT "The rainbow trout genome provides novel insights into evolution after
RT whole-genome duplication in vertebrates.";
RL Nat. Commun. 5:3657-3657(2014).
RN [2] {ECO:0000313|EMBL:CDQ57416.1}
RP NUCLEOTIDE SEQUENCE.
RA Genoscope - CEA;
RL Submitted (MAR-2014) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; FR904286; CDQ57416.1; -; Genomic_DNA.
DR STRING; 8022.A0A060VRH8; -.
DR PaxDb; 8022-A0A060VRH8; -.
DR Proteomes; UP000193380; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR Gene3D; 2.60.120.200; -; 1.
DR Gene3D; 1.20.5.320; 6-Phosphogluconate Dehydrogenase, domain 3; 1.
DR InterPro; IPR008160; Collagen.
DR PANTHER; PTHR24023; COLLAGEN ALPHA; 1.
DR PANTHER; PTHR24023:SF509; COLLAGEN ALPHA-2(XI) CHAIN; 1.
DR Pfam; PF01391; Collagen; 13.
PE 4: Predicted;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000193380};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 434..453
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 465..489
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT REGION 59..86
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 199..276
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 291..407
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 599..647
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 683..710
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 730..966
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 993..1304
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 60..86
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 205..225
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 752..766
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 896..910
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 948..965
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1041..1055
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1167..1188
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1374 AA; 136901 MW; 5354888276B27BA3 CRC64;
MTRALPRSNS PVVDTKGITV FGARLLDDEV FQGDIQQLLI ASNPQAAYDF CEHYSPDCDS
PLPKTQSQDP NTYDVETANS EAGHTPTETD YYYEEAVLQP ESEVIGQEGT TGQVEETLVA
EEVDLAKAGG EVEAFTEEYV TGDLGMKEYD YSYKDYNEPL PEGETDGYMG PALSAVTDEG
GASVSAVKGE KGEPAVLEPG MLIEGPPGPE GPAGLPGPNG PSGPPGSVGD PGERGIPGKS
GIPGADGVPG PPGTSVMLPF RFGSSGGDKG PMVSAQEAQA QAILSQARLA LKGPPGPMGY
TGRTGPLGTP GSSGLKGESG DPGPQGPRGP QGLSGPLGKS GRRGRAGADG ARGMPGEGGP
KGDRGFDGLP GLPGDKGHRG DTGGLGPLGG PGEDGERGDD GDIGPRGLPG EPVSVFLTLP
LTSVPSHYHH RSHFWVNSVC IVLFIATTYH INLMSPAKMP LKYRIMFLSL VHLDSHFSFL
FYVIFFFLFQ GVRGNDGPHG PKGNLVSECF SVLFNLSQLV KRHIQNIQPG MIDKETKYCV
LCNLGPSVFR LSDDNIVTSS ASLTLSPIFI QGPNGPQGTI GYPGPRGIKG TQGIRGLKGH
KGEKGEDGFP GIKGDFGVKG ERGEGGVPGP RGEDGPEGPK GRVGPPGELG PIGLVGEKGK
LGVPGLPGYP GRLGPKGSLG FPGFPGTNGE KGTRGLIGKS GPRGQRGPTV QFNSTKFHVF
ILLLIVKGTS GSDGPSGPPG ERGLPGPQGA NGFPGPKGPP VRPQYDGLPG HPGQRGEVGF
QGKTGPPGPP GVVGPQGSSG ETGPLGERGH PGPPGPPGEQ GLSGPSGKEG TKGDPGPPGG
PGKDGPSGLR GFPGERGMPG TPGGGGLKGS EGPAGPPGTA GSPGERGQAG SGGPIGPPGR
PGPQGPPGPS GEKGVPGEKG PIGPAGRDGV QGPVGLPGAA GSIGVPGEDG DKAKHGQKGA
KGGKGEHVSD ITALILLNVP FTNISIVQGA DGELGARGQQ GPFGAKGDEG SRGFPGAPGP
IGLQGLPGPS GEKGETGDVG PMGPPGPPGP RGPAGPSGAD GPQGPPGGLG NPGNLGDKGE
PGEAGPPGIG GEPGKKGPRG EHGDKGEAGQ PGASGPAGGR GGPGDDGPKG NPGPVGFPGD
PGPPGELGPR GQDGAKGERG EDGEQGQAVN RSAQQAKPQL SSTDVSGLAG TRGPEGRQGE
KGTKGDPGAN GPPGKTGPVG PQGQPGKPGT EGLRGLPGSV GEQGSPGLAG QKGPPGPLGP
PGLPGLRGEG GDKGEKGHSG LIGLIGPTGE QGEKGDRGLP GPQGTHGYKG ETRAYISSEH
THTQNNLLLC LYDTSLLNMY SVARRQTVEF SADAFPVCFR ALGLSVLVAL LACL
//
