ID A0A060VSU4_ONCMY Unreviewed; 596 AA.
AC A0A060VSU4;
DT 03-SEP-2014, integrated into UniProtKB/TrEMBL.
DT 03-SEP-2014, sequence version 1.
DT 27-MAR-2024, entry version 50.
DE RecName: Full=Nuclear receptor subfamily 1 group D member 2 {ECO:0008006|Google:ProtNLM};
GN ORFNames=GSONMT00077007001 {ECO:0000313|EMBL:CDQ58028.1};
OS Oncorhynchus mykiss (Rainbow trout) (Salmo gairdneri).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes;
OC Salmonidae; Salmoninae; Oncorhynchus.
OX NCBI_TaxID=8022 {ECO:0000313|EMBL:CDQ58028.1, ECO:0000313|Proteomes:UP000193380};
RN [1] {ECO:0000313|EMBL:CDQ58028.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=24755649; DOI=10.1038/ncomms4657;
RA Berthelot C., Brunet F., Chalopin D., Juanchich A., Bernard M., Noel B.,
RA Bento P., Da Silva C., Labadie K., Alberti A., Aury J.M., Louis A.,
RA Dehais P., Bardou P., Montfort J., Klopp C., Cabau C., Gaspin C.,
RA Thorgaard G.H., Boussaha M., Quillet E., Guyomard R., Galiana D., Bobe J.,
RA Volff J.N., Genet C., Wincker P., Jaillon O., Roest Crollius H.,
RA Guiguen Y.;
RT "The rainbow trout genome provides novel insights into evolution after
RT whole-genome duplication in vertebrates.";
RL Nat. Commun. 5:3657-3657(2014).
RN [2] {ECO:0000313|EMBL:CDQ58028.1}
RP NUCLEOTIDE SEQUENCE.
RA Genoscope - CEA;
RL Submitted (MAR-2014) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|RuleBase:RU004334}.
CC -!- SIMILARITY: Belongs to the nuclear hormone receptor family.
CC {ECO:0000256|RuleBase:RU004334}.
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DR EMBL; FR904296; CDQ58028.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A060VSU4; -.
DR STRING; 8022.A0A060VSU4; -.
DR PaxDb; 8022-A0A060VSU4; -.
DR Proteomes; UP000193380; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR CDD; cd07166; NR_DBD_REV_ERB; 1.
DR Gene3D; 3.30.50.10; Erythroid Transcription Factor GATA-1, subunit A; 1.
DR Gene3D; 1.10.565.10; Retinoid X Receptor; 1.
DR InterPro; IPR035500; NHR-like_dom_sf.
DR InterPro; IPR000536; Nucl_hrmn_rcpt_lig-bd.
DR InterPro; IPR001723; Nuclear_hrmn_rcpt.
DR InterPro; IPR001628; Znf_hrmn_rcpt.
DR InterPro; IPR013088; Znf_NHR/GATA.
DR PANTHER; PTHR45805; NUCLEAR HORMONE RECEPTOR HR3-RELATED; 1.
DR PANTHER; PTHR45805:SF7; RAR-RELATED ORPHAN RECEPTOR C B-RELATED; 1.
DR Pfam; PF00104; Hormone_recep; 1.
DR Pfam; PF00105; zf-C4; 1.
DR PRINTS; PR00398; STRDHORMONER.
DR PRINTS; PR00047; STROIDFINGER.
DR SMART; SM00430; HOLI; 1.
DR SMART; SM00399; ZnF_C4; 1.
DR SUPFAM; SSF57716; Glucocorticoid receptor-like (DNA-binding domain); 1.
DR SUPFAM; SSF48508; Nuclear receptor ligand-binding domain; 1.
DR PROSITE; PS51843; NR_LBD; 1.
DR PROSITE; PS00031; NUCLEAR_REC_DBD_1; 1.
DR PROSITE; PS51030; NUCLEAR_REC_DBD_2; 1.
PE 3: Inferred from homology;
KW DNA-binding {ECO:0000256|RuleBase:RU004334};
KW Metal-binding {ECO:0000256|RuleBase:RU004334};
KW Nucleus {ECO:0000256|RuleBase:RU004334};
KW Receptor {ECO:0000256|RuleBase:RU004334};
KW Reference proteome {ECO:0000313|Proteomes:UP000193380};
KW Transcription {ECO:0000256|RuleBase:RU004334};
KW Transcription regulation {ECO:0000256|RuleBase:RU004334};
KW Zinc {ECO:0000256|RuleBase:RU004334};
KW Zinc-finger {ECO:0000256|RuleBase:RU004334}.
SQ SEQUENCE 596 AA; 66022 MW; C4909E704E9E0962 CRC64;
MGSIKPGGVI AYISSGSASS PECCLSDSCS SGYLCSSPPH PSLPSRAVGI MVDIASPTTA
KHPRSHGTDK TGRSISTKSS ITKINGMVLL CKVCGDVASG FHYGVHACEG CKGFFRRSIQ
HSIRYKKCLK MENCTVIRIN RNRCQQCRFK KCLAVGMSRD SVRFGRIPKR EKQRMLLEMQ
NAMNNMMMNN NSQHHSMLHG TQSPPCPMEG LPNDGSSSSS ASSSSSISSS SGSNPSSPCS
AQDSMETSSS SASSCSSDSG DDEVPPSRVC HQGTFTYRRE QQQSIKEEPE ESPSPVARET
VKDRRDSRME ELQESWKRCD QDTRGYQPSC NSHQHVTNGP YREERVVYQQ QPAQLNGAPS
GRMPEDSYSL HHRSHNIMHN IQTVSNGYSR PSYSLQDHKT NMVTPSLYVD PSQRSQEIWE
EFSLSFIPAV REVVGFAKRI PGFRDLSEYD QVSLLKNGTF EVLMVCFASL FDVAERTVTF
LTGKCYSLEL LHSLRAGQLL TSMCDFSEKL AALQLDKDEM SLFIAVVLVS ADRSGIQDLK
SVEALQDTLI RALRSLIMTN HANETTTFTK LLLKLPELRS LNNIHSEELL AFKVHS
//
