ID A0A060VZ02_ONCMY Unreviewed; 800 AA.
AC A0A060VZ02;
DT 03-SEP-2014, integrated into UniProtKB/TrEMBL.
DT 03-SEP-2014, sequence version 1.
DT 27-MAR-2024, entry version 28.
DE RecName: Full=JmjC domain-containing protein {ECO:0000259|PROSITE:PS51184};
GN ORFNames=GSONMT00081086001 {ECO:0000313|EMBL:CDQ60092.1};
OS Oncorhynchus mykiss (Rainbow trout) (Salmo gairdneri).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes;
OC Salmonidae; Salmoninae; Oncorhynchus.
OX NCBI_TaxID=8022 {ECO:0000313|EMBL:CDQ60092.1, ECO:0000313|Proteomes:UP000193380};
RN [1] {ECO:0000313|EMBL:CDQ60092.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=24755649; DOI=10.1038/ncomms4657;
RA Berthelot C., Brunet F., Chalopin D., Juanchich A., Bernard M., Noel B.,
RA Bento P., Da Silva C., Labadie K., Alberti A., Aury J.M., Louis A.,
RA Dehais P., Bardou P., Montfort J., Klopp C., Cabau C., Gaspin C.,
RA Thorgaard G.H., Boussaha M., Quillet E., Guyomard R., Galiana D., Bobe J.,
RA Volff J.N., Genet C., Wincker P., Jaillon O., Roest Crollius H.,
RA Guiguen Y.;
RT "The rainbow trout genome provides novel insights into evolution after
RT whole-genome duplication in vertebrates.";
RL Nat. Commun. 5:3657-3657(2014).
RN [2] {ECO:0000313|EMBL:CDQ60092.1}
RP NUCLEOTIDE SEQUENCE.
RA Genoscope - CEA;
RL Submitted (MAR-2014) to the EMBL/GenBank/DDBJ databases.
CC -!- COFACTOR:
CC Name=Fe(2+); Xref=ChEBI:CHEBI:29033;
CC Evidence={ECO:0000256|ARBA:ARBA00001954};
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DR EMBL; FR904340; CDQ60092.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A060VZ02; -.
DR STRING; 8022.A0A060VZ02; -.
DR PaxDb; 8022-A0A060VZ02; -.
DR Proteomes; UP000193380; Unassembled WGS sequence.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR Gene3D; 1.20.58.1360; -; 1.
DR Gene3D; 2.60.120.650; Cupin; 1.
DR InterPro; IPR041070; JHD.
DR InterPro; IPR003347; JmjC_dom.
DR PANTHER; PTHR23123:SF15; LYSINE-SPECIFIC DEMETHYLASE 7A; 1.
DR PANTHER; PTHR23123; PHD/F-BOX CONTAINING PROTEIN; 1.
DR Pfam; PF17811; JHD; 1.
DR Pfam; PF02373; JmjC; 1.
DR SMART; SM00558; JmjC; 1.
DR SUPFAM; SSF51197; Clavaminate synthase-like; 1.
DR PROSITE; PS51184; JMJC; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000193380};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 145..301
FT /note="JmjC"
FT /evidence="ECO:0000259|PROSITE:PS51184"
FT REGION 390..420
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 509..800
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 393..415
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 534..590
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 591..607
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 633..651
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 672..686
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 690..704
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 707..722
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 754..769
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 800 AA; 90050 MW; AEAE3B7470545D1C CRC64;
MFCVSPLAVK KRNNWHRHDY TEQDDGTKPV QAGTSVFVKE LQNRTFASGD EILQWMPGEQ
VTQRYLESHG WQYPIAVSNI EGLGLRLPQP SFSVKDVEHV VGGDKVIDVI DVARQADSKM
KLKEFIKYYY RPHRPKVLNV ISLEFSDTRM ADQVVVPDVA QNMSWVENYW PDDSFFPKPF
VQKYCLMGVK NSYTDFHIDF GGTSVWYHVL WGEKIFYMIK PTQVNLALYE AWSSSPNQSE
VFFGDKVDKC YKCVVQQGTT LLIPTGWIHA VLTSQDCMAF GGNFLHNLNI GMQLRCYEME
RRLKTPDLFK FPYFEAICWY VAKNLLETLK ELREDNCPPQ TYLVEGVKSL ISPLKTWLKR
EVTEPTSEVP DHIRPNRLIK ELTKEIRYLE EDQGSSGGTN KPVKSQGSGG GQCPATRSTL
ERVCPARQAR RAARRLREQQ EQGPKVPSNL EILELHTREV LRRLEVGPLE EDPTFCPPVH
GKFNMVSTAS AAAAENPDTH LRLTLHNGRI IRDARRPGSS TASSPVKAES ERPSVGQLKS
REEMKTESDQ EQQHSTMGGE EKPGHLRGIE RVKTELGEEA SGHSDVSDMD SDSDSNTQQN
TSSEEDSGSS QSDDDEERGS SQRATGHTIE LDQTDLNLRH KPLKRERPTS PSTEEAIQGM
LSMAGLLCPS KPDEVSTSQE PWWSSPSRGS PERREQHQRR VAGDKSPMDS QGNSSSEAWD
NQGPLSLGAL SHDASPEADN YQYCDPSMSP PLHPSKRHAS NSPPVSNQAT KGKRPKKGMA
TAKQRLGKIL KMNRHNGVFV
//
