ID A0A060WD65_ONCMY Unreviewed; 818 AA.
AC A0A060WD65;
DT 03-SEP-2014, integrated into UniProtKB/TrEMBL.
DT 03-SEP-2014, sequence version 1.
DT 27-MAR-2024, entry version 34.
DE RecName: Full=Scaffold attachment factor B2 {ECO:0008006|Google:ProtNLM};
GN ORFNames=GSONMT00072569001 {ECO:0000313|EMBL:CDQ65097.1};
OS Oncorhynchus mykiss (Rainbow trout) (Salmo gairdneri).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes;
OC Salmonidae; Salmoninae; Oncorhynchus.
OX NCBI_TaxID=8022 {ECO:0000313|EMBL:CDQ65097.1, ECO:0000313|Proteomes:UP000193380};
RN [1] {ECO:0000313|EMBL:CDQ65097.1, ECO:0000313|Proteomes:UP000193380}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=24755649; DOI=10.1038/ncomms4657;
RA Berthelot C., Brunet F., Chalopin D., Juanchich A., Bernard M., Noel B.,
RA Bento P., Da Silva C., Labadie K., Alberti A., Aury J.M., Louis A.,
RA Dehais P., Bardou P., Montfort J., Klopp C., Cabau C., Gaspin C.,
RA Thorgaard G.H., Boussaha M., Quillet E., Guyomard R., Galiana D., Bobe J.,
RA Volff J.N., Genet C., Wincker P., Jaillon O., Roest Crollius H.,
RA Guiguen Y.;
RT "The rainbow trout genome provides novel insights into evolution after
RT whole-genome duplication in vertebrates.";
RL Nat. Commun. 5:3657-3657(2014).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
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DR EMBL; FR904494; CDQ65097.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A060WD65; -.
DR STRING; 8022.A0A060WD65; -.
DR PaxDb; 8022-A0A060WD65; -.
DR Proteomes; UP000193380; Chromosome 5.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR CDD; cd12679; RRM_SAFB1_SAFB2; 1.
DR Gene3D; 3.30.70.330; -; 1.
DR Gene3D; 1.10.720.30; SAP domain; 1.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR000504; RRM_dom.
DR InterPro; IPR034781; SAFB1_2_RBD.
DR InterPro; IPR003034; SAP_dom.
DR InterPro; IPR036361; SAP_dom_sf.
DR PANTHER; PTHR15683; SCAFFOLD ATTACHMENT FACTOR B-RELATED; 1.
DR PANTHER; PTHR15683:SF4; SCAFFOLD ATTACHMENT FACTOR B2; 1.
DR Pfam; PF00076; RRM_1; 1.
DR SMART; SM00360; RRM; 1.
DR SMART; SM00513; SAP; 1.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 1.
DR SUPFAM; SSF68906; SAP domain; 1.
DR PROSITE; PS50102; RRM; 1.
DR PROSITE; PS50800; SAP; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000193380};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884, ECO:0000256|PROSITE-
KW ProRule:PRU00176}.
SQ SEQUENCE 818 AA; 92401 MW; 9FF8F125AAA48432 CRC64;
MAENYSTGEA GGVEIPEGAI RKLSELRVID LKAELKRRNL DATGIKSTLT ERLKKAIEEE
GGNPDEMVVV LDATPKAALA KRTSKGKRPE NDESEDCTIE EDSGDGQDDN MQDMDILDMN
VLDEAENDNS MPAEEEYDTD EVLNSPSDEV NTEILADEEA MNEDERNGIS GSLELMREAK
PEEVQEKDPK PKDSKEEIET DKVAGSCLSE PLNEERQEPP TEDQATIGDK VNVAEEDNLE
PELSTSDMDV AKLTASEMKD TGDKQNVPDE ADDAESECAQ AVSVSEQGAG ETESAVDSEM
VSKAEGEEKT EENAAESTTV KESSSVEGDD QKKSSDEEKG SKPDSKDEKG PAGSAPASSG
RNLWVSGLSS NTRATDLKTL FSKHGKVVGA KVVTNARSPG ARCYGFVTMC STEEATKCIS
HLNRTELHGR MISVERAKNE PAGKKPADKS DAKSGTDRRH SSDSKSDANK DEMAEGEVGK
DGKRNERTVV MDKSKGEPVI SVKAKSKDRS SKSRDRKSPS KEKDILSFDQ IKEQRERERR
RQREREVREV DRRRPSGERG SGPDRGSVDN RTERERIRLF REKEERERLL RKRNWLEVEK
ERLNFDRMER EFLERERQRV EYERRREQER IQRERDELRR QQEQLRFEQD RRPLKRPYAD
LDNRKDDWQD KRLAMDDRYG GRSDFGRQER YQDIDHRDRG RYQDDAVIDR RDTSRAVVAD
RDSTHFSDRT ERHGRDTWTA AGSYDKRTIN PREGRDWDRT WQTGRDGGIP GQSHMGARGG
MASRGGGYMT TGTSQSLSGA LNRQNQMMQG GGAFGRRY
//
