ID A0A060WJ88_ONCMY Unreviewed; 858 AA.
AC A0A060WJ88;
DT 03-SEP-2014, integrated into UniProtKB/TrEMBL.
DT 03-SEP-2014, sequence version 1.
DT 27-MAR-2024, entry version 36.
DE RecName: Full=RHD domain-containing protein {ECO:0000259|PROSITE:PS50254};
GN ORFNames=GSONMT00061472001 {ECO:0000313|EMBL:CDQ67343.1};
OS Oncorhynchus mykiss (Rainbow trout) (Salmo gairdneri).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes;
OC Salmonidae; Salmoninae; Oncorhynchus.
OX NCBI_TaxID=8022 {ECO:0000313|EMBL:CDQ67343.1, ECO:0000313|Proteomes:UP000193380};
RN [1] {ECO:0000313|EMBL:CDQ67343.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=24755649; DOI=10.1038/ncomms4657;
RA Berthelot C., Brunet F., Chalopin D., Juanchich A., Bernard M., Noel B.,
RA Bento P., Da Silva C., Labadie K., Alberti A., Aury J.M., Louis A.,
RA Dehais P., Bardou P., Montfort J., Klopp C., Cabau C., Gaspin C.,
RA Thorgaard G.H., Boussaha M., Quillet E., Guyomard R., Galiana D., Bobe J.,
RA Volff J.N., Genet C., Wincker P., Jaillon O., Roest Crollius H.,
RA Guiguen Y.;
RT "The rainbow trout genome provides novel insights into evolution after
RT whole-genome duplication in vertebrates.";
RL Nat. Commun. 5:3657-3657(2014).
RN [2] {ECO:0000313|EMBL:CDQ67343.1}
RP NUCLEOTIDE SEQUENCE.
RA Genoscope - CEA;
RL Submitted (MAR-2014) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; FR904582; CDQ67343.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A060WJ88; -.
DR STRING; 8022.A0A060WJ88; -.
DR PaxDb; 8022-A0A060WJ88; -.
DR Proteomes; UP000193380; Unassembled WGS sequence.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProt.
DR GO; GO:0043229; C:intracellular organelle; IEA:UniProt.
DR GO; GO:0043227; C:membrane-bounded organelle; IEA:UniProt.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR Gene3D; 2.60.40.10; Immunoglobulins; 1.
DR Gene3D; 2.60.40.340; Rel homology domain (RHD), DNA-binding domain; 1.
DR InterPro; IPR013783; Ig-like_fold.
DR InterPro; IPR014756; Ig_E-set.
DR InterPro; IPR002909; IPT_dom.
DR InterPro; IPR008366; NFAT.
DR InterPro; IPR008967; p53-like_TF_DNA-bd_sf.
DR InterPro; IPR032397; RHD_dimer.
DR InterPro; IPR011539; RHD_DNA_bind_dom.
DR InterPro; IPR037059; RHD_DNA_bind_dom_sf.
DR PANTHER; PTHR12533; NFAT; 1.
DR PANTHER; PTHR12533:SF11; NUCLEAR FACTOR OF ACTIVATED T-CELLS, CYTOPLASMIC 4; 1.
DR Pfam; PF16179; RHD_dimer; 1.
DR Pfam; PF00554; RHD_DNA_bind; 1.
DR PRINTS; PR01789; NUCFACTORATC.
DR SMART; SM00429; IPT; 1.
DR SUPFAM; SSF81296; E set domains; 1.
DR SUPFAM; SSF49417; p53-like transcription factors; 1.
DR PROSITE; PS50254; REL_2; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000193380}.
FT DOMAIN 316..503
FT /note="RHD"
FT /evidence="ECO:0000259|PROSITE:PS50254"
FT REGION 183..277
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 716..820
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 183..197
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 226..252
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 721..752
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 753..788
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 858 AA; 93877 MW; DA26C3E16B4F2513 CRC64;
MGAAPGSGWE EGEFEFKLVF EEDPTRQLRG PSPLCNADQE HTIVGERTES ALSLLDSSPG
TGLESPGLDV LYVHTCLSVS GGCVHVSESH VLECPSIQIT TITPEDDTAP AGSNFWDTGG
GWDRERLYLP LMDPFCYREG STGAGSLSPS PASSPSSRGW LSPASSCDSL LVEEEELNEV
TSHFCLSPSS RPTSPGGKKR RNSPLASPCT SRRSSYSEDH SCTLEGEDST SQSQAHNSSF
ELSIPQKTRK TSLEQVSPRD VEQEQGPAHS SHCPLPEPLQ QRREVASMGM DYLSVPPALG
WGRTRASAHS PMFRSNALPP LDWPLPTQFD QYELRIDVQP RPHHRAHYET EGSRGAVKAS
PGGHPVVTLT GYTERQPLSL QVFVGTADDR SIRPHPFYQI HRVTGKMVGT ASQESVQAGT
KILDIPLNPE TNMTALIDCA GILKLRNSDI ELRKGETDVG RKNTRVRLVF RTHLPLGLPV
APPGRMLALQ VTSVPIECSQ RSAQELPVVE SVSVISCSVE GGEELLLGGS NFLPMSRVLF
MERGTDGKLQ WEEEAHVDRD NSSECLLCVQ IPAYGDLSVN RPVSVCLYVS NGKRKRSSTH
CFKYLPVMFK EDDPLPSHPS VLPLEGVTLC SMGGPSRVDR GLHLRNDPTP KERGLALHLP
PYPSAYSPPY QGHGYQEEYC HKPEAVGDSR GSLSERRPSF ENLELGFTEL LPPLYPRVSQ
PPSPSTWLDS PYLSSSPSPS HSSSLSPFPA GSPISSSPLP PMTTSPYPHY PYPQEVCPSP
PSNSSPYQDF YPPPYSHNEV WDHQGRGPRE REAQAGSKMQ TTPLEFASSS SIHHITLEEV
NEFIGEDIRS FQTDSQPG
//
