ID A0A060WP78_ONCMY Unreviewed; 294 AA.
AC A0A060WP78;
DT 03-SEP-2014, integrated into UniProtKB/TrEMBL.
DT 03-SEP-2014, sequence version 1.
DT 24-JAN-2024, entry version 27.
DE RecName: Full=C2H2-type domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=GSONMT00076188001 {ECO:0000313|EMBL:CDQ66864.1};
OS Oncorhynchus mykiss (Rainbow trout) (Salmo gairdneri).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes;
OC Salmonidae; Salmoninae; Oncorhynchus.
OX NCBI_TaxID=8022 {ECO:0000313|EMBL:CDQ66864.1, ECO:0000313|Proteomes:UP000193380};
RN [1] {ECO:0000313|EMBL:CDQ66864.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=24755649; DOI=10.1038/ncomms4657;
RA Berthelot C., Brunet F., Chalopin D., Juanchich A., Bernard M., Noel B.,
RA Bento P., Da Silva C., Labadie K., Alberti A., Aury J.M., Louis A.,
RA Dehais P., Bardou P., Montfort J., Klopp C., Cabau C., Gaspin C.,
RA Thorgaard G.H., Boussaha M., Quillet E., Guyomard R., Galiana D., Bobe J.,
RA Volff J.N., Genet C., Wincker P., Jaillon O., Roest Crollius H.,
RA Guiguen Y.;
RT "The rainbow trout genome provides novel insights into evolution after
RT whole-genome duplication in vertebrates.";
RL Nat. Commun. 5:3657-3657(2014).
RN [2] {ECO:0000313|EMBL:CDQ66864.1}
RP NUCLEOTIDE SEQUENCE.
RA Genoscope - CEA;
RL Submitted (MAR-2014) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; FR904559; CDQ66864.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A060WP78; -.
DR STRING; 8022.A0A060WP78; -.
DR PaxDb; 8022-A0A060WP78; -.
DR Proteomes; UP000193380; Unassembled WGS sequence.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR Gene3D; 3.30.160.60; Classic Zinc Finger; 3.
DR InterPro; IPR003604; Matrin/U1-like-C_Znf_C2H2.
DR InterPro; IPR036236; Znf_C2H2_sf.
DR InterPro; IPR013087; Znf_C2H2_type.
DR PANTHER; PTHR46786; ZINC FINGER MATRIN-TYPE PROTEIN 3; 1.
DR PANTHER; PTHR46786:SF1; ZINC FINGER MATRIN-TYPE PROTEIN 3; 1.
DR Pfam; PF12874; zf-met; 3.
DR SMART; SM00355; ZnF_C2H2; 3.
DR SMART; SM00451; ZnF_U1; 3.
DR SUPFAM; SSF57667; beta-beta-alpha zinc fingers; 3.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000193380}.
FT DOMAIN 65..99
FT /note="U1-type"
FT /evidence="ECO:0000259|SMART:SM00451"
FT DOMAIN 68..92
FT /note="C2H2-type"
FT /evidence="ECO:0000259|SMART:SM00355"
FT DOMAIN 149..183
FT /note="U1-type"
FT /evidence="ECO:0000259|SMART:SM00451"
FT DOMAIN 152..176
FT /note="C2H2-type"
FT /evidence="ECO:0000259|SMART:SM00355"
FT DOMAIN 248..282
FT /note="U1-type"
FT /evidence="ECO:0000259|SMART:SM00451"
FT DOMAIN 251..275
FT /note="C2H2-type"
FT /evidence="ECO:0000259|SMART:SM00355"
FT REGION 1..54
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 24..38
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 294 AA; 32813 MW; AB1F6080ED669F67 CRC64;
MTPDPHRFPL SSPLSAKPPT HLQLVQGPPC PVPPPTAQAT LNSRPQEKDA QIGATDQDAT
LEELCKPLYC KLCNVTLNSA QQAQAHYQGK NHSKKLRNFY AGSQQPPAIR IPEVIEPLSQ
QLLMTPPTDS ATPKQPVSFM GASRVILATE NDYCKLCDAS FSSPAVAQAH YQGKNHAKRL
RLAEAQQSSS ILESTECVQR RPRKEGSEYR FIKNRRTPQV PIAVPGPYYN PRPRQRIPRD
LAMCVTPSGQ FYCSMCNSGA SEEADFRLHL ESKQHKSKVS EQRYRSEMEN LGYT
//
