ID A0A060XJT6_ONCMY Unreviewed; 903 AA.
AC A0A060XJT6;
DT 03-SEP-2014, integrated into UniProtKB/TrEMBL.
DT 03-SEP-2014, sequence version 1.
DT 08-NOV-2023, entry version 26.
DE RecName: Full=SAP domain-containing protein {ECO:0000259|PROSITE:PS50800};
GN ORFNames=GSONMT00042983001 {ECO:0000313|EMBL:CDQ79502.1};
OS Oncorhynchus mykiss (Rainbow trout) (Salmo gairdneri).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes;
OC Salmonidae; Salmoninae; Oncorhynchus.
OX NCBI_TaxID=8022 {ECO:0000313|EMBL:CDQ79502.1, ECO:0000313|Proteomes:UP000193380};
RN [1] {ECO:0000313|EMBL:CDQ79502.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=24755649; DOI=10.1038/ncomms4657;
RA Berthelot C., Brunet F., Chalopin D., Juanchich A., Bernard M., Noel B.,
RA Bento P., Da Silva C., Labadie K., Alberti A., Aury J.M., Louis A.,
RA Dehais P., Bardou P., Montfort J., Klopp C., Cabau C., Gaspin C.,
RA Thorgaard G.H., Boussaha M., Quillet E., Guyomard R., Galiana D., Bobe J.,
RA Volff J.N., Genet C., Wincker P., Jaillon O., Roest Crollius H.,
RA Guiguen Y.;
RT "The rainbow trout genome provides novel insights into evolution after
RT whole-genome duplication in vertebrates.";
RL Nat. Commun. 5:3657-3657(2014).
RN [2] {ECO:0000313|EMBL:CDQ79502.1}
RP NUCLEOTIDE SEQUENCE.
RA Genoscope - CEA;
RL Submitted (MAR-2014) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; FR905464; CDQ79502.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A060XJT6; -.
DR STRING; 8022.A0A060XJT6; -.
DR PaxDb; 8022-A0A060XJT6; -.
DR Proteomes; UP000193380; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:InterPro.
DR InterPro; IPR007180; DUF382.
DR InterPro; IPR006568; PSP_pro-rich.
DR InterPro; IPR003034; SAP_dom.
DR PANTHER; PTHR12785; SPLICING FACTOR 3B; 1.
DR PANTHER; PTHR12785:SF6; SPLICING FACTOR 3B SUBUNIT 2; 1.
DR Pfam; PF04037; DUF382; 1.
DR Pfam; PF04046; PSP; 1.
DR SMART; SM00581; PSP; 1.
DR SMART; SM00513; SAP; 1.
DR PROSITE; PS50800; SAP; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000193380}.
FT DOMAIN 23..57
FT /note="SAP"
FT /evidence="ECO:0000259|PROSITE:PS50800"
FT REGION 187..280
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 298..386
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 413..456
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 704..763
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 856..903
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 202..247
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 341..357
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 358..381
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 413..454
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 704..718
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 719..738
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 903 AA; 101655 MW; A008D417C7BAA40D CRC64;
MASDGPPGTE PIPSDLGSSV AALNTWTNPE LQAKLGELGA PNMGPREEML DRLKGYMMQT
GMMLSKPNLG SDDKPMTPQM PGIPPMPPMP MPPMPPGMGM LQAMSMMAGG PPPPGMRMGM
EPPGMPPSLS QEDQLKMVQQ RAAMMMQHEE RAKQQGESRA MEEHMKEQEL LEQQKRAAVM
LEHERQQELA KRQHGGPGPR MSDPGSRPPG MMPPMMRGVN PPGMNPPPPG MNPPPPGMNP
GGMNPPPPGM SMMHTQRQRV PPPPGEDARE VWQGEDVGVG PKIPQALEKI LQLKEIRQEQ
LGATPTEEEE EESPEMEMNN SSAAVLSETE EDDGSLSKKD KNRKRRNRKK KNKKRREQEK
REHAEEKKEE DGEKEKEPEV EIEYITEEPE IYDPNFIFFK RIFEAFKLTD DVKKEKEKEP
EKEPAPALMR KKGFEEEKKD SDDSDDEIRP DVPKMSKKKL RRMNRLTVAE LKQLVARPDV
VEMHDVTAQE PKLLVHLKAT RNTVPVPRHW CFKRKYLQGK RGIEKPPFEL PEFIKRTGIQ
EMREALQEKE DAKTMKTKMR EKVRPKMGKI DIDYQKLHDA FFKWQMKPKL SIHGDLYYEG
KEFETRLKEK KPGDLSDELR IALGMPVGPN SHKVPPPWLI AMQRYGPPPS YPNLKIPGLN
SPIPESCSFG YHAGGWGKPP VDETGKPLYG DVFGTNAVDF QAKAEEEEVD RTPWGELEPS
DEDSSEEEEE DESDEEKPDE TGFFTPADSG LITPGGFSSV PAGMETPELI ELRKKKIEEA
MDGNETPQLF TVLPERRTGS GGAAMMASTH IYDVSGAMAG RKAGGGQEFQ GVEVALAPEE
LELDPMAMTQ KYEEHVRNQE AQVEKEDFSD MVAEHAAKQK QKKRKAQPQD TRGGAKKYKE
FKF
//
