ID A0A060XUW8_ONCMY Unreviewed; 887 AA.
AC A0A060XUW8;
DT 03-SEP-2014, integrated into UniProtKB/TrEMBL.
DT 03-SEP-2014, sequence version 1.
DT 27-MAR-2024, entry version 36.
DE RecName: Full=RNA helicase {ECO:0000256|ARBA:ARBA00012552};
DE EC=3.6.4.13 {ECO:0000256|ARBA:ARBA00012552};
GN ORFNames=GSONMT00012784001 {ECO:0000313|EMBL:CDQ83286.1};
OS Oncorhynchus mykiss (Rainbow trout) (Salmo gairdneri).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes;
OC Salmonidae; Salmoninae; Oncorhynchus.
OX NCBI_TaxID=8022 {ECO:0000313|EMBL:CDQ83286.1, ECO:0000313|Proteomes:UP000193380};
RN [1] {ECO:0000313|EMBL:CDQ83286.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=24755649; DOI=10.1038/ncomms4657;
RA Berthelot C., Brunet F., Chalopin D., Juanchich A., Bernard M., Noel B.,
RA Bento P., Da Silva C., Labadie K., Alberti A., Aury J.M., Louis A.,
RA Dehais P., Bardou P., Montfort J., Klopp C., Cabau C., Gaspin C.,
RA Thorgaard G.H., Boussaha M., Quillet E., Guyomard R., Galiana D., Bobe J.,
RA Volff J.N., Genet C., Wincker P., Jaillon O., Roest Crollius H.,
RA Guiguen Y.;
RT "The rainbow trout genome provides novel insights into evolution after
RT whole-genome duplication in vertebrates.";
RL Nat. Commun. 5:3657-3657(2014).
RN [2] {ECO:0000313|EMBL:CDQ83286.1}
RP NUCLEOTIDE SEQUENCE.
RA Genoscope - CEA;
RL Submitted (MAR-2014) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the DNA2/NAM7 helicase family. SDE3 subfamily.
CC {ECO:0000256|ARBA:ARBA00005601}.
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DR EMBL; FR906148; CDQ83286.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A060XUW8; -.
DR STRING; 8022.A0A060XUW8; -.
DR PaxDb; 8022-A0A060XUW8; -.
DR Proteomes; UP000193380; Unassembled WGS sequence.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.
DR GO; GO:0004386; F:helicase activity; IEA:InterPro.
DR CDD; cd18078; DEXXQc_Mov10L1; 1.
DR CDD; cd18808; SF1_C_Upf1; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR InterPro; IPR045055; DNA2/NAM7-like.
DR InterPro; IPR041679; DNA2/NAM7-like_C.
DR InterPro; IPR041677; DNA2/NAM7_AAA_11.
DR InterPro; IPR049080; MOV-10-like_beta-barrel.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR047187; SF1_C_Upf1.
DR PANTHER; PTHR10887; DNA2/NAM7 HELICASE FAMILY; 1.
DR PANTHER; PTHR10887:SF322; RNA HELICASE MOV10L1; 1.
DR Pfam; PF13086; AAA_11; 2.
DR Pfam; PF13087; AAA_12; 1.
DR Pfam; PF21634; MOV-10_beta-barrel; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
PE 3: Inferred from homology;
KW Cytoplasm {ECO:0000256|ARBA:ARBA00022490};
KW Reference proteome {ECO:0000313|Proteomes:UP000193380}.
FT DOMAIN 279..343
FT /note="Helicase MOV-10-like beta-barrel"
FT /evidence="ECO:0000259|Pfam:PF21634"
FT DOMAIN 444..543
FT /note="DNA2/NAM7 helicase helicase"
FT /evidence="ECO:0000259|Pfam:PF13086"
FT DOMAIN 557..626
FT /note="DNA2/NAM7 helicase helicase"
FT /evidence="ECO:0000259|Pfam:PF13086"
FT DOMAIN 634..844
FT /note="DNA2/NAM7 helicase-like C-terminal"
FT /evidence="ECO:0000259|Pfam:PF13087"
SQ SEQUENCE 887 AA; 97886 MW; B60E3E3438E1E621 CRC64;
MATSQHSMNT VNNRSVPEAE INSLLEDKGG LVVGDKTHFG VLLLGESREL VVWIQNRGSE
THRLKCCEFA GWDSEEQFNL GTVTDPPGQR KGIDGDVVGE TGEAHQDTVH KPAIRTDERD
VEIAPGEKVS VKVGCRAKNL GRCAELLLLH FPSFTIGRRL EVTVGSKEES LLQPVAPYCP
AAPLPLPQAA QVVTVMAAHP PQRLTKRHLP NFLGNYPVPQ ALRDCMEADR DVLVAQPCLG
ETLSAANMRL RFSSLLWLEE LQAESELREF SISGALLRRG AIYLHLEVLG LAEGRPSLFI
GDRVALKKPI SGGVVMEYIG YVTEISDEDV SLRVNTEFQH GYLGEPLDVE FTFNRLSMRR
CHLALDQNKH FEENVFFPKA VMLQAPLWTG EWGPEEVKEG TLTTDGVKLS SVSVDMVSKA
TQTKPDSRLP SKPIPNPGQL FNQQLNPSQR EAVKRILAGE CRPTPYILFG PPGTGKTITL
IESILQVYHR LPSSRVLVCT PSNSAADLVC IRLHESGYLN SASLARVNAS GRQEEAIPEV
LRQYSQAGED IRQASFHRIV VSTCSSAGMF YQIGLRVGHF THVFLDEVGQ ATEPEALIPL
GLLSERDGQI VLAGDPRQLG PIVKSKLAQA FGLGVSLLER LMANTLYSRE NGGYNPVLVT
KLVYNYRSHE ALLALPSRLF YNGELCVRAQ RLVVDSLCHW SRLPTKGFPL IFHGVRGTEM
REGNNPSWFN PGEAVQVMLY CCQLAKKLYN PVAASDIGII APYRKQSEKI RVLLHRVGLS
DIKVGSVEEF QGQEFLVIIL STVRANELVQ GNDLQSILGF LSNPKRFNVA ITRPKALLIV
VGNPHILVKD PCFTALLQYC FENGAYLGCD PPTCLRAAHR AASEKEE
//