ID A0A060XYE9_ONCMY Unreviewed; 310 AA.
AC A0A060XYE9;
DT 03-SEP-2014, integrated into UniProtKB/TrEMBL.
DT 03-SEP-2014, sequence version 1.
DT 24-JAN-2024, entry version 24.
DE RecName: Full=U1-type domain-containing protein {ECO:0000259|SMART:SM00451};
GN ORFNames=GSONMT00056414001 {ECO:0000313|EMBL:CDQ84267.1};
OS Oncorhynchus mykiss (Rainbow trout) (Salmo gairdneri).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes;
OC Salmonidae; Salmoninae; Oncorhynchus.
OX NCBI_TaxID=8022 {ECO:0000313|EMBL:CDQ84267.1, ECO:0000313|Proteomes:UP000193380};
RN [1] {ECO:0000313|EMBL:CDQ84267.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=24755649; DOI=10.1038/ncomms4657;
RA Berthelot C., Brunet F., Chalopin D., Juanchich A., Bernard M., Noel B.,
RA Bento P., Da Silva C., Labadie K., Alberti A., Aury J.M., Louis A.,
RA Dehais P., Bardou P., Montfort J., Klopp C., Cabau C., Gaspin C.,
RA Thorgaard G.H., Boussaha M., Quillet E., Guyomard R., Galiana D., Bobe J.,
RA Volff J.N., Genet C., Wincker P., Jaillon O., Roest Crollius H.,
RA Guiguen Y.;
RT "The rainbow trout genome provides novel insights into evolution after
RT whole-genome duplication in vertebrates.";
RL Nat. Commun. 5:3657-3657(2014).
RN [2] {ECO:0000313|EMBL:CDQ84267.1}
RP NUCLEOTIDE SEQUENCE.
RA Genoscope - CEA;
RL Submitted (MAR-2014) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; FR906378; CDQ84267.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A060XYE9; -.
DR STRING; 8022.A0A060XYE9; -.
DR PaxDb; 8022-A0A060XYE9; -.
DR Proteomes; UP000193380; Unassembled WGS sequence.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR Gene3D; 3.30.160.60; Classic Zinc Finger; 1.
DR InterPro; IPR003604; Matrin/U1-like-C_Znf_C2H2.
DR InterPro; IPR036236; Znf_C2H2_sf.
DR InterPro; IPR013087; Znf_C2H2_type.
DR PANTHER; PTHR23067; DOUBLE-STRANDED RNA-BINDING ZINC FINGER PROTEIN; 1.
DR PANTHER; PTHR23067:SF6; ZINC FINGER PROTEIN 385C; 1.
DR Pfam; PF12874; zf-met; 1.
DR SMART; SM00451; ZnF_U1; 1.
DR SUPFAM; SSF57667; beta-beta-alpha zinc fingers; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000193380}.
FT DOMAIN 76..110
FT /note="U1-type"
FT /evidence="ECO:0000259|SMART:SM00451"
FT REGION 1..77
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 94..132
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 174..205
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..40
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 63..77
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 94..108
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 310 AA; 33101 MW; 0CD69EBEBAAE65C0 CRC64;
MLTPVSEVSS MELATLSPGH QGEVSPSSQA SESGASDTSG PEQGPEAPGT ALESGSQPDT
SRTEGGEEVK DPKRIKPHLH CPVCKVTVNS TSQLEAHNSG TKHKQMLEGQ SVQPRRRGKV
AGAGGRSACK SKRLGTKGAW GCPARTSTAR CVRSMSTRRP SSASEAIEPL VYHMNSRRHK
DRLAGKPPKP KFSPHNKSQP TSSLSNVRWA GYAGGAVSAM KKMFSQYNLT SLSTQTKLAF
QKQLTKSLTT GFLPSPLTQP TLCTMATNPL ALRHPAGTTF FQTPFLSPTL FRPAPGPLRA
THPSIIFSPY
//
