ID A0A060Y2W1_ONCMY Unreviewed; 1465 AA.
AC A0A060Y2W1;
DT 03-SEP-2014, integrated into UniProtKB/TrEMBL.
DT 03-SEP-2014, sequence version 1.
DT 08-NOV-2023, entry version 28.
DE RecName: Full=SAP domain-containing protein {ECO:0000259|PROSITE:PS50800};
GN ORFNames=GSONMT00019901001 {ECO:0000313|EMBL:CDQ83545.1};
OS Oncorhynchus mykiss (Rainbow trout) (Salmo gairdneri).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes;
OC Salmonidae; Salmoninae; Oncorhynchus.
OX NCBI_TaxID=8022 {ECO:0000313|EMBL:CDQ83545.1, ECO:0000313|Proteomes:UP000193380};
RN [1] {ECO:0000313|EMBL:CDQ83545.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=24755649; DOI=10.1038/ncomms4657;
RA Berthelot C., Brunet F., Chalopin D., Juanchich A., Bernard M., Noel B.,
RA Bento P., Da Silva C., Labadie K., Alberti A., Aury J.M., Louis A.,
RA Dehais P., Bardou P., Montfort J., Klopp C., Cabau C., Gaspin C.,
RA Thorgaard G.H., Boussaha M., Quillet E., Guyomard R., Galiana D., Bobe J.,
RA Volff J.N., Genet C., Wincker P., Jaillon O., Roest Crollius H.,
RA Guiguen Y.;
RT "The rainbow trout genome provides novel insights into evolution after
RT whole-genome duplication in vertebrates.";
RL Nat. Commun. 5:3657-3657(2014).
RN [2] {ECO:0000313|EMBL:CDQ83545.1}
RP NUCLEOTIDE SEQUENCE.
RA Genoscope - CEA;
RL Submitted (MAR-2014) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; FR906203; CDQ83545.1; -; Genomic_DNA.
DR STRING; 8022.A0A060Y2W1; -.
DR PaxDb; 8022-A0A060Y2W1; -.
DR Proteomes; UP000193380; Unassembled WGS sequence.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR CDD; cd12432; RRM_ACINU; 1.
DR Gene3D; 3.30.70.330; -; 1.
DR Gene3D; 1.10.720.30; SAP domain; 1.
DR InterPro; IPR034257; Acinus_RRM.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR032552; RSB_motif.
DR InterPro; IPR003034; SAP_dom.
DR InterPro; IPR036361; SAP_dom_sf.
DR PANTHER; PTHR46589; APOPTOTIC CHROMATIN CONDENSATION INDUCER IN THE NUCLEUS; 1.
DR PANTHER; PTHR46589:SF1; APOPTOTIC CHROMATIN CONDENSATION INDUCER IN THE NUCLEUS; 1.
DR Pfam; PF16294; RSB_motif; 1.
DR Pfam; PF02037; SAP; 1.
DR SMART; SM00513; SAP; 1.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 1.
DR SUPFAM; SSF68906; SAP domain; 1.
DR PROSITE; PS50800; SAP; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000193380}.
FT DOMAIN 43..77
FT /note="SAP"
FT /evidence="ECO:0000259|PROSITE:PS50800"
FT REGION 1..35
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 126..569
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 626..1166
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1259..1465
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 19..35
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 133..151
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 445..469
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 494..510
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 714..737
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 750..767
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 778..812
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 827..858
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 859..883
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 884..920
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 967..988
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1008..1027
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1044..1070
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1082..1112
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1113..1152
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1291..1380
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1402..1444
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1465 AA; 158962 MW; 9FE892DF702CC43E CRC64;
MGYSYPILSD PNKNDACWSS RESTERQESK MADEDVTLDG KSLQSLRVAD LKAALEHRHL
PKSGAKNALI KRLKGALMLE NVKKTSTSHI GLQPNSQIGE EMSQNSFIKQ YLAQQQELLR
QRLEREAREA AEADGPEEEE EDEDEEDTEQ DNDSASYHPD KHCPIPSQPP LTRAEEGGGG
GTMMMGQGIM SQGMGKGTMS RRPHFGPGSM PQESPDIPGS WTQQRLSLHA GLRHEELTTP
SPPRAVASLS VRVLGDPERQ GLPPSMPPRV QALENEGTAP ADDDRPAHYV LHLSRSARAA
PSAGGNRVQE DSDDDDSSEE DEDEWGPAAG ARRGVGGGGR GRSPPPGQQP PTHSTRSARA
APSAGGNRVQ EDSDDDDSSE EDEDEWGPAA GARRGVGGGG RGRSPPPRPQ QPSPSIPVGR
ERSRRKLQPP QHIPPQQVVH QPPMQLRQPT PPPSPPPELS FPLPDTPKQS PPDMDEEPEG
AGAGVAVRSP SGGLQRHDSD SSSRSSSPEP LAQRRPGPLS LLARKMASEG AFGKRGEGAS
DGQTGPGGES SGPDGSSSVP GAGPGVGVVL FPGAAITHIG GSSAEHSGTV PVPEVPAPVS
MFGSGAQFHP LSLVSGAAVP GITLTVEPQG TSGETAQKRT EKQVESESCL PPWKHGRDVT
SVSLPFGSGG SEVPAVHQGD SPKKSPFGRD EPLSSPPGST ACLPALAPKK PRMFSDTSSG
SMAPPPKPGQ QGSVVVTTPG EPPLKQEVLV SGAQQDTDNT IEVTSPNKAS AEKPGWKTGE
IVKMEKESDS QAEKVTPKAA GETRRRGPEE AVEVEPMGPA LPPSYPGKGE EEKKRKEDVR
KKEEERCRQR KRVSDRRSSP SSGGDSSSSD SDSGSSSSHS SGSTSSRDKK KKSVPGKGRG
DERRRLEKGG EKKQPSREKK QSSLSEPSGP GPMEVERPDP EDSRAPQPTP EGDPENSEGR
MEESTTPKAL ATRNISLTTG SKTSPEGAGE AESGTAAGRK RRWGSCTAVT TKKPSISITT
DSLKSLIPDI KPSQEAVMDL HPDDSQLSGD EDTSTTREDQ GLDKDLKIRR TVTQVVPGES
HENGQGEREE EEEENKRERE RTHKEKRKNS YSEDGMVCQS STTHDANAKK VTPSDTLVRR
SISQQKSGVS VTIDDPVRTD KLPSPPRGKV SNIVHVCNLV RPFTLGQLKE LLNRTGSVVE
EGFWIDKIKS HCYVTYSSTE EAVATRAALH RVKWPQSNPK VLSVDFCEQN ELDFHRGLLT
VDPREEHRPQ PAVGPGGPKV RPAGLPPLMP ERDGRADRGA VGGVRDQWAE REREMERRER
TRAEREWDRD KVRDFGGKPG EERERGRRSR SLDRERRRKE REGKEKKTDK KDEPPVKLLD
DLFNKTKAAP CIYWLPLTEE QANQRGKERE ERQKERERRR KEQQEEEDKK REEEKKERMK
SREEGGAAVS TGGGIKQIDK SLLWP
//
