ID A0A060Y6Z7_ONCMY Unreviewed; 675 AA.
AC A0A060Y6Z7;
DT 03-SEP-2014, integrated into UniProtKB/TrEMBL.
DT 03-SEP-2014, sequence version 1.
DT 27-MAR-2024, entry version 28.
DE RecName: Full=PDZ domain-containing protein {ECO:0000259|PROSITE:PS50106};
GN ORFNames=GSONMT00060219001 {ECO:0000313|EMBL:CDQ87526.1};
OS Oncorhynchus mykiss (Rainbow trout) (Salmo gairdneri).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes;
OC Salmonidae; Salmoninae; Oncorhynchus.
OX NCBI_TaxID=8022 {ECO:0000313|EMBL:CDQ87526.1, ECO:0000313|Proteomes:UP000193380};
RN [1] {ECO:0000313|EMBL:CDQ87526.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=24755649; DOI=10.1038/ncomms4657;
RA Berthelot C., Brunet F., Chalopin D., Juanchich A., Bernard M., Noel B.,
RA Bento P., Da Silva C., Labadie K., Alberti A., Aury J.M., Louis A.,
RA Dehais P., Bardou P., Montfort J., Klopp C., Cabau C., Gaspin C.,
RA Thorgaard G.H., Boussaha M., Quillet E., Guyomard R., Galiana D., Bobe J.,
RA Volff J.N., Genet C., Wincker P., Jaillon O., Roest Crollius H.,
RA Guiguen Y.;
RT "The rainbow trout genome provides novel insights into evolution after
RT whole-genome duplication in vertebrates.";
RL Nat. Commun. 5:3657-3657(2014).
RN [2] {ECO:0000313|EMBL:CDQ87526.1}
RP NUCLEOTIDE SEQUENCE.
RA Genoscope - CEA;
RL Submitted (MAR-2014) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; FR907972; CDQ87526.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A060Y6Z7; -.
DR STRING; 8022.A0A060Y6Z7; -.
DR PaxDb; 8022-A0A060Y6Z7; -.
DR Proteomes; UP000193380; Unassembled WGS sequence.
DR GO; GO:0042995; C:cell projection; IEA:UniProtKB-KW.
DR CDD; cd07353; harmonin_N; 1.
DR CDD; cd00992; PDZ_signaling; 2.
DR Gene3D; 1.20.1160.20; -; 1.
DR Gene3D; 2.30.42.10; -; 2.
DR InterPro; IPR030237; Harmonin_N.
DR InterPro; IPR001478; PDZ.
DR InterPro; IPR036034; PDZ_sf.
DR PANTHER; PTHR23116:SF36; HARMONIN; 1.
DR PANTHER; PTHR23116; PDZ DOMAIN CONTAINING WHIRLIN AND HARMONIN-RELATED; 1.
DR Pfam; PF00595; PDZ; 2.
DR Pfam; PF21219; USH1C_N; 1.
DR PRINTS; PR01217; PRICHEXTENSN.
DR SMART; SM00228; PDZ; 2.
DR SUPFAM; SSF50156; PDZ domain-like; 2.
DR PROSITE; PS50106; PDZ; 2.
PE 4: Predicted;
KW Cell projection {ECO:0000256|ARBA:ARBA00023273};
KW Reference proteome {ECO:0000313|Proteomes:UP000193380}.
FT DOMAIN 87..155
FT /note="PDZ"
FT /evidence="ECO:0000259|PROSITE:PS50106"
FT DOMAIN 214..284
FT /note="PDZ"
FT /evidence="ECO:0000259|PROSITE:PS50106"
FT REGION 332..411
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 521..583
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 595..618
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 332..387
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 521..553
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 595..617
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 675 AA; 76195 MW; 74F01FCF2AE4C4B1 CRC64;
MERKVAREFR HKVELLIDNE AEKDYLYDVL RMYHQSMELP VLVGDLKLVI NEPSRLPLFD
AIRPLIPLKH QVEYDLLTPK RSRKLKEVRL DRTHPEGLGL SVRGGLEFGC GLFISQIVKD
GQAGNSGLQM GDEIVRINGY AISSCIHEEV INLIKTKKIV SLKVRQVGMI PVKSSTEEPL
KWQFVDQFVS DSGEKKSSVA GLASMGGKEI KEKKVFLSLV GTKGMGVSIS SGPTQKPGIY
ISNVKSGSLA AEVGLQIGDQ IVEVNGVEFT NLDHKEAVRV LKSSRSLTIT VLTGAGSELF
MTDEERLAVE ARRELDRREL MHQKRVALET NKMVKEQQEK ERQRKMEISQ KTAEEEERYR
KEMEKIEAAE RKHHREWEED WAPREQPKTK KKKRKKKKVS NTDTLQEQRK NKKEMEFELK
LAAEKEEMYE REKQLKISRL VQEVGIVIDR LAQEVGVMIG RLAQDVGVMI SRLAQEVGVM
IGRLAQDVGV MIIPSYLHLL SLPSYHNLPL SSLLLTPIPL PSSPTRPPSS PRPSPQPPPP
PSPPSPPPPS QHPEEQLGGV SHGGYHHHPT SPPETRSEWE GGGYMPRGGY YSSNASEMSY
PSSPKQIAPS PPNQRRQMAP VMSKPVMLSQ NQSHRPTLHA EGLPPEMLKR MVTYNNSFRS
NNKRQVIHTH HHLLP
//