ID A0A060YA50_ONCMY Unreviewed; 871 AA.
AC A0A060YA50;
DT 03-SEP-2014, integrated into UniProtKB/TrEMBL.
DT 03-SEP-2014, sequence version 1.
DT 27-MAR-2024, entry version 34.
DE RecName: Full=Collagen alpha-1(XXVIII) chain {ECO:0008006|Google:ProtNLM};
GN ORFNames=GSONMT00008804001 {ECO:0000313|EMBL:CDQ88798.1};
OS Oncorhynchus mykiss (Rainbow trout) (Salmo gairdneri).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes;
OC Salmonidae; Salmoninae; Oncorhynchus.
OX NCBI_TaxID=8022 {ECO:0000313|EMBL:CDQ88798.1, ECO:0000313|Proteomes:UP000193380};
RN [1] {ECO:0000313|EMBL:CDQ88798.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=24755649; DOI=10.1038/ncomms4657;
RA Berthelot C., Brunet F., Chalopin D., Juanchich A., Bernard M., Noel B.,
RA Bento P., Da Silva C., Labadie K., Alberti A., Aury J.M., Louis A.,
RA Dehais P., Bardou P., Montfort J., Klopp C., Cabau C., Gaspin C.,
RA Thorgaard G.H., Boussaha M., Quillet E., Guyomard R., Galiana D., Bobe J.,
RA Volff J.N., Genet C., Wincker P., Jaillon O., Roest Crollius H.,
RA Guiguen Y.;
RT "The rainbow trout genome provides novel insights into evolution after
RT whole-genome duplication in vertebrates.";
RL Nat. Commun. 5:3657-3657(2014).
RN [2] {ECO:0000313|EMBL:CDQ88798.1}
RP NUCLEOTIDE SEQUENCE.
RA Genoscope - CEA;
RL Submitted (MAR-2014) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; FR908961; CDQ88798.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A060YA50; -.
DR STRING; 8022.A0A060YA50; -.
DR PaxDb; 8022-A0A060YA50; -.
DR Proteomes; UP000193380; Unassembled WGS sequence.
DR GO; GO:0005581; C:collagen trimer; IEA:UniProtKB-KW.
DR GO; GO:0004867; F:serine-type endopeptidase inhibitor activity; IEA:InterPro.
DR Gene3D; 4.10.410.10; Pancreatic trypsin inhibitor Kunitz domain; 1.
DR Gene3D; 3.40.50.410; von Willebrand factor, type A domain; 1.
DR InterPro; IPR008160; Collagen.
DR InterPro; IPR002223; Kunitz_BPTI.
DR InterPro; IPR036880; Kunitz_BPTI_sf.
DR InterPro; IPR002035; VWF_A.
DR InterPro; IPR036465; vWFA_dom_sf.
DR PANTHER; PTHR24023; COLLAGEN ALPHA; 1.
DR PANTHER; PTHR24023:SF1082; COLLAGEN ALPHA-1(X) CHAIN; 1.
DR Pfam; PF01391; Collagen; 2.
DR Pfam; PF00014; Kunitz_BPTI; 1.
DR Pfam; PF00092; VWA; 1.
DR PRINTS; PR00759; BASICPTASE.
DR PRINTS; PR00453; VWFADOMAIN.
DR SMART; SM00131; KU; 1.
DR SMART; SM00327; VWA; 1.
DR SUPFAM; SSF57362; BPTI-like; 1.
DR SUPFAM; SSF53300; vWA-like; 1.
DR PROSITE; PS50279; BPTI_KUNITZ_2; 1.
DR PROSITE; PS50234; VWFA; 1.
PE 4: Predicted;
KW Collagen {ECO:0000256|ARBA:ARBA00023119};
KW Disulfide bond {ECO:0000256|ARBA:ARBA00023157};
KW Reference proteome {ECO:0000313|Proteomes:UP000193380};
KW Signal {ECO:0000256|SAM:SignalP}.
FT SIGNAL 1..21
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 22..871
FT /note="Collagen alpha-1(XXVIII) chain"
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5001591807"
FT DOMAIN 473..653
FT /note="VWFA"
FT /evidence="ECO:0000259|PROSITE:PS50234"
FT DOMAIN 810..860
FT /note="BPTI/Kunitz inhibitor"
FT /evidence="ECO:0000259|PROSITE:PS50279"
FT REGION 73..314
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 366..444
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 664..727
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 767..804
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 666..714
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 871 AA; 89797 MW; 2222B0B5FCF4EBB6 CRC64;
MLLSLFAATF NLCLLCLSSQ GDRGQAGPAG IQGENGIGLP GPKVHLVCFC FCLTNELFYV
TCSISPWPQG FQGEKGPHGE GLPGPKGDRG LAGPRGPRGQ TGAGIKGEKG EFGPPGHPGL
VGLTGAGIQG EKGVEGPRGP PGGRGPQGEG LPGPKGDQGF PGELGATGER GVGEPGPKGE
LGTSGLAGLP GLPGEDGAPG QKGEAGVAGI RGPDGAAGIG TQGEKGDQGQ RGIRGLHGPP
GMTGPSGAKG EPGTPGRLGM PGLPGRAIAG PKGDLGPPGP SGPTGETGYG LPGPKGDRGN
PGPTGPFGSK GEGCARTTGM KLILTELPLF SHRSHSECNT LTHTGSPAVM AMSKLNQLYI
IGFQGNIGRK GPPGPNGPPG EGLQGPKGEQ GSQGVTGPRG PIGEGFPGGK GDRGLQGERG
NKGVKGGMGD SGVPGESGRP GVKGEVGLTR EDIIKLIKEI CGCGIKCKER PMELVFVIDS
SESVGPENFE IIKDFVTALV DRTTVGRNAT RIGLVLYSLD VHLEFNLARY MTKQDVKQAI
RKMSYVGEGT YTSTAIRKAT QEAFYSARTG VRKVAIVITD GQTDKREPVK LDIAVREAHA
ANIEMYALGI VNTSDTTQAE FLRELNLIAS DPDSEHMYLI DDFNTLPALE SKLVSQFCED
ENGALGNSGH GNSGQGNSGH GNNGHLNNEH GNTYNEDPIL NPSGRTSSQS HIRGRGDNFD
LPLNAGPLPV QVQVDDEEGE DLDVRTHVRG GSTVAVANKT VSIFPAKESS HSNTAVSSSG
SASSSSGTTG SASSSSEGQF QPSVSLNPRC NLSLDQGTCR EYNIQWYYDK QANSCAQFWY
GSCEGNANRF ETEDACKKTC VLSRTGMCRS S
//
