ID A0A060YIM9_ONCMY Unreviewed; 1665 AA.
AC A0A060YIM9;
DT 03-SEP-2014, integrated into UniProtKB/TrEMBL.
DT 03-SEP-2014, sequence version 1.
DT 24-JAN-2024, entry version 25.
DE RecName: Full=TRASH domain-containing protein {ECO:0000259|SMART:SM00746};
DE Flags: Fragment;
GN ORFNames=GSONMT00046091001 {ECO:0000313|EMBL:CDQ89274.1};
OS Oncorhynchus mykiss (Rainbow trout) (Salmo gairdneri).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes;
OC Salmonidae; Salmoninae; Oncorhynchus.
OX NCBI_TaxID=8022 {ECO:0000313|EMBL:CDQ89274.1, ECO:0000313|Proteomes:UP000193380};
RN [1] {ECO:0000313|EMBL:CDQ89274.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=24755649; DOI=10.1038/ncomms4657;
RA Berthelot C., Brunet F., Chalopin D., Juanchich A., Bernard M., Noel B.,
RA Bento P., Da Silva C., Labadie K., Alberti A., Aury J.M., Louis A.,
RA Dehais P., Bardou P., Montfort J., Klopp C., Cabau C., Gaspin C.,
RA Thorgaard G.H., Boussaha M., Quillet E., Guyomard R., Galiana D., Bobe J.,
RA Volff J.N., Genet C., Wincker P., Jaillon O., Roest Crollius H.,
RA Guiguen Y.;
RT "The rainbow trout genome provides novel insights into evolution after
RT whole-genome duplication in vertebrates.";
RL Nat. Commun. 5:3657-3657(2014).
RN [2] {ECO:0000313|EMBL:CDQ89274.1}
RP NUCLEOTIDE SEQUENCE.
RA Genoscope - CEA;
RL Submitted (MAR-2014) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; FR909361; CDQ89274.1; -; Genomic_DNA.
DR STRING; 8022.A0A060YIM9; -.
DR PaxDb; 8022-A0A060YIM9; -.
DR Proteomes; UP000193380; Unassembled WGS sequence.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR InterPro; IPR021893; DUF3504.
DR InterPro; IPR011017; TRASH_dom.
DR InterPro; IPR010507; Znf_MYM.
DR PANTHER; PTHR45736; ZINC FINGER MYM-TYPE PROTEIN; 1.
DR PANTHER; PTHR45736:SF5; ZINC FINGER MYM-TYPE PROTEIN 4; 1.
DR Pfam; PF12012; DUF3504; 1.
DR Pfam; PF06467; zf-FCS; 3.
DR SMART; SM00746; TRASH; 10.
DR SUPFAM; SSF57716; Glucocorticoid receptor-like (DNA-binding domain); 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000193380};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT DOMAIN 506..542
FT /note="TRASH"
FT /evidence="ECO:0000259|SMART:SM00746"
FT DOMAIN 553..594
FT /note="TRASH"
FT /evidence="ECO:0000259|SMART:SM00746"
FT DOMAIN 614..649
FT /note="TRASH"
FT /evidence="ECO:0000259|SMART:SM00746"
FT DOMAIN 656..692
FT /note="TRASH"
FT /evidence="ECO:0000259|SMART:SM00746"
FT DOMAIN 698..736
FT /note="TRASH"
FT /evidence="ECO:0000259|SMART:SM00746"
FT DOMAIN 746..782
FT /note="TRASH"
FT /evidence="ECO:0000259|SMART:SM00746"
FT DOMAIN 819..855
FT /note="TRASH"
FT /evidence="ECO:0000259|SMART:SM00746"
FT DOMAIN 861..896
FT /note="TRASH"
FT /evidence="ECO:0000259|SMART:SM00746"
FT DOMAIN 907..942
FT /note="TRASH"
FT /evidence="ECO:0000259|SMART:SM00746"
FT DOMAIN 948..983
FT /note="TRASH"
FT /evidence="ECO:0000259|SMART:SM00746"
FT REGION 1..248
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 285..399
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1178..1243
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1275..1327
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1644..1665
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..18
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 19..63
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 74..92
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 102..122
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 135..178
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 200..237
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 293..319
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 320..361
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 370..385
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1178..1192
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1202..1225
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1279..1293
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1297..1319
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT NON_TER 1665
FT /evidence="ECO:0000313|EMBL:CDQ89274.1"
SQ SEQUENCE 1665 AA; 182758 MW; F4BEFBA43AD079B2 CRC64;
MAESQKADHS ENIDFPQHKG ETEQPSQAGA SMDSVDPGAS HSNTASADGN NGDDATNAVS
ACFSSIIDRA GDTGNSGHAR ETDAEDSQMV EETVKTDALL TVVEMDSKED SQTERETASV
DVPQMERETA SVDVPQTDRE TASADVSQTE RETLSADASQ TERETLSAEA SQTERETASA
XXXGCLSDGD SPCGCLSDGN SPCGASQTVR EKIGTDAPQT VEKIGSTSGS QTNGETDIPL
DMGVVDADDE MEVNAIKVED DQMQEEDNLE GMPVITAVEE EGKMVAFSSN SLDHGDEVEK
MDTGTDSLTE NEVEEPSKTG QVEKTNSMPS IMDTVSMTGD TEQPAEETSV VKASGSSLPM
EEDQSEDVKP FHPSPTTSSE AIHPQNSEGI DCPAGLENGV AGQPVKVVAS AQLAAEPVST
SVETISMVKV KDEPVDEEYD QALAPAVLSE GVKDEPDAAE ELKISNVFSV GGCPTTNVAA
LPKTVIPAPA SSSIPPLIPM AMRVACSACK KVLLKGQTAY QRKGSSDLFC STSCLTSYSP
PPVKMTGPAK KPCHYCLNFN IANPKDVITT PVDTMGTVKD FCSQTCLSSF NFKRNSAVST
LSSSLSTMTG AVKCSMCKKA CVSKHEVIFQ GSMHKLCSEV CFTRFRSTNK LSMNSCQSCN
NYCYGKVTVL VVQGVNKTFC SDGCVATFKQ KAKKPVACTM CRNFRSPVDM VDSADSEGKL
EMFCSTGCVT AHKVQTVSSS GARVECNTCG QKVVPSFHLA MSDGSIRNFC TMNCVVTFQD
QFNKSNSQSQ INVAPSTGST APPAAQTRDK VSQGTRLPCF QCHRLFSSKP ELIQFKDKMV
FLCSVNCSEE YRKINYEMAR CEYCKIEKPA KEVKRINKRD YTFCSEGCKL LYKHDLTKRW
GKHCKICAYC ASTAQKAVTG QYGGKLEDFC SDECKSHYTL LFCQVAKCDA CERQGKLIET
LPMLGEVKHF CNLQCLLDFC SLQTQNQGKP QGQKVAISIA PSPSNTTTAT SVSDPVIANV
ISLASSPTGQ PNYANTSLQG TVPSRHVKYV GNASTQTQAP RAPPPRAQKN KALLCKPMVQ
NKGIMCKPNF TTTGCQTDDD FPKVIIVPVP VPVYVPVPMN LYTQYTPQPV GLPIPLPVPM
FLPVTLDNAE RIVETIQDIK EKIPSDPFEA DLILMAEMVA DEGREKSPER PPERPPAPVV
QDDQVSTYSG DLDTDELSNF LTTWDDEPPP TPGVSSRHSR PYAHETLRPI VDINVPATPP
PPIMDIEADF PVQTLELMAH WRDQERDRSP SPPPSPPRRR ARRKARDGLP QKKKKRKSRA
AETASAVPSL AAAKSDVVPG EPPKLQHMYG VDAWKRWVQW SKTQPDLEKP RFGSRPMEIK
EDVLKCTTAE LSYGLCRFIC EVKRPNGESY SQDSLFYLCL GVQQYLFQNG RMENIFTDLF
YGKFTLEITK LLKDFKPTIT TSGYLHSRVE EEYLWDCKQL GAYSPIVLLN TLLFFCTKFF
QFKTVAQHRQ LSFAHVMRCT KSIHDNTKSN FLRFYPPIPK KDLATETAAD ADGVAAKRKR
EDEEKEEVLE MMENSENPLR CPVRLYEFYL SKCSDSVKQR TNVFFLLPER SCVPNSPMWF
SSQGLDDHTL DTMLTRILTV REIHLGDPQR NEPQSKDPEW TPDQD
//
