ID A0A060YZ42_ONCMY Unreviewed; 242 AA.
AC A0A060YZ42;
DT 03-SEP-2014, integrated into UniProtKB/TrEMBL.
DT 03-SEP-2014, sequence version 1.
DT 27-MAR-2024, entry version 22.
DE RecName: Full=Cadherin domain-containing protein {ECO:0008006|Google:ProtNLM};
DE Flags: Fragment;
GN ORFNames=GSONMT00054323001 {ECO:0000313|EMBL:CDQ97046.1};
OS Oncorhynchus mykiss (Rainbow trout) (Salmo gairdneri).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes;
OC Salmonidae; Salmoninae; Oncorhynchus.
OX NCBI_TaxID=8022 {ECO:0000313|EMBL:CDQ97046.1, ECO:0000313|Proteomes:UP000193380};
RN [1] {ECO:0000313|EMBL:CDQ97046.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=24755649; DOI=10.1038/ncomms4657;
RA Berthelot C., Brunet F., Chalopin D., Juanchich A., Bernard M., Noel B.,
RA Bento P., Da Silva C., Labadie K., Alberti A., Aury J.M., Louis A.,
RA Dehais P., Bardou P., Montfort J., Klopp C., Cabau C., Gaspin C.,
RA Thorgaard G.H., Boussaha M., Quillet E., Guyomard R., Galiana D., Bobe J.,
RA Volff J.N., Genet C., Wincker P., Jaillon O., Roest Crollius H.,
RA Guiguen Y.;
RT "The rainbow trout genome provides novel insights into evolution after
RT whole-genome duplication in vertebrates.";
RL Nat. Commun. 5:3657-3657(2014).
RN [2] {ECO:0000313|EMBL:CDQ97046.1}
RP NUCLEOTIDE SEQUENCE.
RA Genoscope - CEA;
RL Submitted (MAR-2014) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; FR928598; CDQ97046.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A060YZ42; -.
DR STRING; 8022.A0A060YZ42; -.
DR PaxDb; 8022-A0A060YZ42; -.
DR Proteomes; UP000193380; Unassembled WGS sequence.
DR InterPro; IPR039005; CSPG_rpt.
DR PANTHER; PTHR45739:SF3; FRAS-RELATED EXTRACELLULAR MATRIX PROTEIN 1B PRECURSOR; 1.
DR PANTHER; PTHR45739; MATRIX PROTEIN, PUTATIVE-RELATED; 1.
DR Pfam; PF16184; Cadherin_3; 1.
DR PROSITE; PS51854; CSPG; 1.
PE 4: Predicted;
KW Glycoprotein {ECO:0000256|ARBA:ARBA00023180};
KW Reference proteome {ECO:0000313|Proteomes:UP000193380};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Signal {ECO:0000256|ARBA:ARBA00022729}.
FT REPEAT 32..126
FT /note="CSPG"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU01201"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:CDQ97046.1"
SQ SEQUENCE 242 AA; 26243 MW; C396DA9D08F83194 CRC64;
KCRKCECHLS LAPLWPSPHP PPTQILPVND EPPQLGPGLL GGLTCEEGGL VQVTAEYLFA
TDADSDDARL IYMLARTPAR GELQRGGVTV DKFSQQDVLQ GLIYYIHTGG EIGASPVSDS
VTLIVSDGEA GGMDSCCHGD ALPPPVPLHG TLPVYDLNVT VLPVNNKAPV ITMGNPLSLQ
CQKGTILGMA SNGYIYRDIQ CIRKVFRPLP FFQIFLILKW IELKMLLINL YTSPHNDKAK
IG
//