ID A0A061DA01_BABBI Unreviewed; 365 AA.
AC A0A061DA01;
DT 03-SEP-2014, integrated into UniProtKB/TrEMBL.
DT 03-SEP-2014, sequence version 1.
DT 24-JAN-2024, entry version 33.
DE SubName: Full=Radical SAM domain containing protein, putative {ECO:0000313|EMBL:CDR97338.1};
GN ORFNames=BBBOND_0312410 {ECO:0000313|EMBL:CDR97338.1};
OS Babesia bigemina.
OC Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Piroplasmida;
OC Babesiidae; Babesia.
OX NCBI_TaxID=5866 {ECO:0000313|EMBL:CDR97338.1, ECO:0000313|Proteomes:UP000033188};
RN [1] {ECO:0000313|Proteomes:UP000033188}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Bond {ECO:0000313|Proteomes:UP000033188};
RX PubMed=24799432; DOI=10.1093/nar/gku322;
RA Jackson A.P., Otto T.D., Darby A., Ramaprasad A., Xia D., Echaide I.E.,
RA Farber M., Gahlot S., Gamble J., Gupta D., Gupta Y., Jackson L.,
RA Malandrin L., Malas T.B., Moussa E., Nair M., Reid AJ., Sanders M.,
RA Sharma J., Tracey A., Quail M.A., Weir W., Wastling J.M., Hall N.,
RA Willadsen P., Lingelbach K., Shiels B., Tait A., Berriman M., Allred D.R.,
RA Pain A.;
RT "The evolutionary dynamics of variant antigen genes in Babesia reveal a
RT history of genomic innovation underlying host-parasite interaction.";
RL Nucleic Acids Res. 42:7113-7131(2014).
CC -!- COFACTOR:
CC Name=[4Fe-4S] cluster; Xref=ChEBI:CHEBI:49883;
CC Evidence={ECO:0000256|ARBA:ARBA00001966};
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DR EMBL; LK391709; CDR97338.1; -; Genomic_DNA.
DR RefSeq; XP_012769524.1; XM_012914070.1.
DR AlphaFoldDB; A0A061DA01; -.
DR STRING; 5866.A0A061DA01; -.
DR EnsemblProtists; CDR97338; CDR97338; BBBOND_0312410.
DR GeneID; 24565879; -.
DR KEGG; bbig:BBBOND_0312410; -.
DR VEuPathDB; PiroplasmaDB:BBBOND_0312410; -.
DR OMA; QVGCSLD; -.
DR OrthoDB; 276083at2759; -.
DR Proteomes; UP000033188; Chromosome 3.
DR GO; GO:0009536; C:plastid; IEA:UniProtKB-KW.
DR GO; GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
DR GO; GO:0001510; P:RNA methylation; IEA:GOC.
DR GO; GO:0006364; P:rRNA processing; IEA:InterPro.
DR CDD; cd01335; Radical_SAM; 1.
DR Gene3D; 1.10.150.530; -; 1.
DR Gene3D; 3.20.20.70; Aldolase class I; 1.
DR InterPro; IPR013785; Aldolase_TIM.
DR InterPro; IPR040072; Methyltransferase_A.
DR InterPro; IPR004383; rRNA_lsu_MTrfase_RlmN/Cfr.
DR InterPro; IPR007197; rSAM.
DR PANTHER; PTHR30544; 23S RRNA METHYLTRANSFERASE; 1.
DR PANTHER; PTHR30544:SF5; RADICAL_SAM DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF04055; Radical_SAM; 1.
DR PIRSF; PIRSF006004; CHP00048; 1.
DR SFLD; SFLDF00275; adenosine_C2_methyltransferase; 1.
DR SFLD; SFLDG01062; methyltransferase_(Class_A); 1.
DR SUPFAM; SSF102114; Radical SAM enzymes; 1.
DR PROSITE; PS51918; RADICAL_SAM; 1.
PE 4: Predicted;
KW 4Fe-4S {ECO:0000256|ARBA:ARBA00022485};
KW Cytoplasm {ECO:0000256|ARBA:ARBA00022490};
KW Iron {ECO:0000256|ARBA:ARBA00023004};
KW Iron-sulfur {ECO:0000256|ARBA:ARBA00023014};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Methyltransferase {ECO:0000256|ARBA:ARBA00022603};
KW Reference proteome {ECO:0000313|Proteomes:UP000033188};
KW S-adenosyl-L-methionine {ECO:0000256|ARBA:ARBA00022691};
KW Transferase {ECO:0000256|ARBA:ARBA00022679}.
FT DOMAIN 100..329
FT /note="Radical SAM core"
FT /evidence="ECO:0000259|PROSITE:PS51918"
SQ SEQUENCE 365 AA; 41589 MW; AD0BED8D21E198D1 CRC64;
MICSALERSA RYAGICDVLR RSHAPRYRAS QILRSVYQTK VPSYLDMLHI PRQLRENLHE
HFDGSLLSLK ACSTHKSDRA CKILFEYRDG SKVEAVLLSF PTHKSLCISS QVGCAYACSF
CATGRIGLKR NLSVDEITDQ VLYFQQLGHE IDSISFMGMG EPLSNPNVFR AMRVLSDRQL
FGTSSRRINI STVGILPGIK KLNRDHPKVN LAFSMHSPFT DQRNKLVPAN NVYPFQEVFG
LLDERIRLTG KRVWVSYVLM KGENDTVAHA EELVKLIKKR PEELQYLYHV NLIPYNTARS
IGVYERTEET DIDKFKGVLK KSKISYSFRN HFGQSIDAAC GQLFADYDPA DQSQLFGHRR
KVNTS
//