ID A0A061DIN1_THECC Unreviewed; 338 AA.
AC A0A061DIN1;
DT 03-SEP-2014, integrated into UniProtKB/TrEMBL.
DT 03-SEP-2014, sequence version 1.
DT 27-MAR-2024, entry version 44.
DE SubName: Full=MADS-box transcription factor family protein, putative {ECO:0000313|EMBL:EOX92380.1};
GN ORFNames=TCM_001335 {ECO:0000313|EMBL:EOX92380.1};
OS Theobroma cacao (Cacao) (Cocoa).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma.
OX NCBI_TaxID=3641 {ECO:0000313|EMBL:EOX92380.1, ECO:0000313|Proteomes:UP000026915};
RN [1] {ECO:0000313|EMBL:EOX92380.1, ECO:0000313|Proteomes:UP000026915}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Matina 1-6 {ECO:0000313|Proteomes:UP000026915};
RX PubMed=23731509; DOI=10.1186/gb-2013-14-6-r53;
RA Motamayor J.C., Mockaitis K., Schmutz J., Haiminen N., Iii D.L.,
RA Cornejo O., Findley S.D., Zheng P., Utro F., Royaert S., Saski C.,
RA Jenkins J., Podicheti R., Zhao M., Scheffler B.E., Stack J.C., Feltus F.A.,
RA Mustiga G.M., Amores F., Phillips W., Marelli J.P., May G.D., Shapiro H.,
RA Ma J., Bustamante C.D., Schnell R.J., Main D., Gilbert D., Parida L.,
RA Kuhn D.N.;
RT "The genome sequence of the most widely cultivated cacao type and its use
RT to identify candidate genes regulating pod color.";
RL Genome Biol. 14:R53.1-R53.24(2013).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
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DR EMBL; CM001879; EOX92380.1; -; Genomic_DNA.
DR RefSeq; XP_017972470.1; XM_018116981.1.
DR AlphaFoldDB; A0A061DIN1; -.
DR SMR; A0A061DIN1; -.
DR EnsemblPlants; EOX92380; EOX92380; TCM_001335.
DR EnsemblPlants; Tc01v2_t010300.1; Tc01v2_p010300.1; Tc01v2_g010300.
DR GeneID; 18611743; -.
DR Gramene; EOX92380; EOX92380; TCM_001335.
DR Gramene; Tc01v2_t010300.1; Tc01v2_p010300.1; Tc01v2_g010300.
DR KEGG; tcc:18611743; -.
DR eggNOG; KOG0014; Eukaryota.
DR HOGENOM; CLU_827409_0_0_1; -.
DR InParanoid; A0A061DIN1; -.
DR OMA; AKLEIWP; -.
DR OrthoDB; 941828at2759; -.
DR Proteomes; UP000026915; Chromosome 1.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0000981; F:DNA-binding transcription factor activity, RNA polymerase II-specific; IBA:GO_Central.
DR GO; GO:0046983; F:protein dimerization activity; IEA:InterPro.
DR GO; GO:0000978; F:RNA polymerase II cis-regulatory region sequence-specific DNA binding; IBA:GO_Central.
DR GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IBA:GO_Central.
DR CDD; cd00120; MADS; 1.
DR Gene3D; 3.40.1810.10; Transcription factor, MADS-box; 1.
DR InterPro; IPR002100; TF_MADSbox.
DR InterPro; IPR036879; TF_MADSbox_sf.
DR PANTHER; PTHR48019:SF224; MADS-BOX DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR48019; SERUM RESPONSE FACTOR HOMOLOG; 1.
DR Pfam; PF00319; SRF-TF; 1.
DR PRINTS; PR00404; MADSDOMAIN.
DR SMART; SM00432; MADS; 1.
DR SUPFAM; SSF55455; SRF-like; 1.
DR PROSITE; PS50066; MADS_BOX_2; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000026915};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 1..49
FT /note="MADS-box"
FT /evidence="ECO:0000259|PROSITE:PS50066"
SQ SEQUENCE 338 AA; 38279 MW; B3FDE327C5B1F7EF CRC64;
MGRGKMNMKF ITKEKIRVST YQKRKKGLIK KAHEFSILCG VETCVIIYGP QLKDGPAKLE
IWPSDPAKVM HVINKYKGKP LDVRERKCFN VFDFFAIRQK KLDDEICKLR KANIDAKFST
WDDRINNFSI NQIWALLARF DSNLEAASKK IKMIKGNHQC LIEDSKSGIL TGPSTQARLN
HSNQARPCLF QKNLDLEVTS RQQPMSGLKP FDMNIVPSFY PFVSGEALQM QPFNVNPIDN
SMMLSTNGSD FTQVDGESSS SITYSSLSPQ ACYDPSASML DNVMFNNPWG VPICFYGPFM
QAMTPFGQSA MPSFPFQYGE IYRDADDQCG SKSKKPKF
//
