ID A0A061DK17_THECC Unreviewed; 365 AA.
AC A0A061DK17;
DT 03-SEP-2014, integrated into UniProtKB/TrEMBL.
DT 03-SEP-2014, sequence version 1.
DT 27-MAR-2024, entry version 35.
DE SubName: Full=RING/FYVE/PHD zinc finger superfamily protein isoform 1 {ECO:0000313|EMBL:EOX92697.1};
GN ORFNames=TCM_001601 {ECO:0000313|EMBL:EOX92697.1};
OS Theobroma cacao (Cacao) (Cocoa).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma.
OX NCBI_TaxID=3641 {ECO:0000313|EMBL:EOX92697.1, ECO:0000313|Proteomes:UP000026915};
RN [1] {ECO:0000313|EMBL:EOX92697.1, ECO:0000313|Proteomes:UP000026915}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Matina 1-6 {ECO:0000313|Proteomes:UP000026915};
RX PubMed=23731509; DOI=10.1186/gb-2013-14-6-r53;
RA Motamayor J.C., Mockaitis K., Schmutz J., Haiminen N., Iii D.L.,
RA Cornejo O., Findley S.D., Zheng P., Utro F., Royaert S., Saski C.,
RA Jenkins J., Podicheti R., Zhao M., Scheffler B.E., Stack J.C., Feltus F.A.,
RA Mustiga G.M., Amores F., Phillips W., Marelli J.P., May G.D., Shapiro H.,
RA Ma J., Bustamante C.D., Schnell R.J., Main D., Gilbert D., Parida L.,
RA Kuhn D.N.;
RT "The genome sequence of the most widely cultivated cacao type and its use
RT to identify candidate genes regulating pod color.";
RL Genome Biol. 14:R53.1-R53.24(2013).
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; CM001879; EOX92697.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A061DK17; -.
DR STRING; 3641.A0A061DK17; -.
DR EnsemblPlants; EOX92697; EOX92697; TCM_001601.
DR Gramene; EOX92697; EOX92697; TCM_001601.
DR eggNOG; KOG1609; Eukaryota.
DR HOGENOM; CLU_044552_1_0_1; -.
DR InParanoid; A0A061DK17; -.
DR OMA; FNPQNSH; -.
DR Proteomes; UP000026915; Chromosome 1.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR011016; Znf_RING-CH.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR46214:SF12; RING_FYVE_PHD ZINC FINGER SUPERFAMILY PROTEIN; 1.
DR PANTHER; PTHR46214; ZINC FINGER, RING-CH-TYPE; 1.
DR Pfam; PF12906; RINGv; 1.
DR SMART; SM00744; RINGv; 1.
DR SUPFAM; SSF57850; RING/U-box; 1.
DR PROSITE; PS51292; ZF_RING_CH; 1.
PE 4: Predicted;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000026915};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 274..297
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 309..328
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 340..357
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 108..175
FT /note="RING-CH-type"
FT /evidence="ECO:0000259|PROSITE:PS51292"
FT REGION 73..94
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 365 AA; 39302 MW; AD2866A97198E8BE CRC64;
MSKECLPHAV NGGVSNDSCP NADSDDSGTY SQCSRDKEAG LATCRVCHCV ESDKRGDAAL
GFLGITPPLP EAVKSNAEAK PNSNGIPKDV ESDFSHAKSV GRESGFVEFI SPEGEVFICS
TDLEIGSCHH HDALIELGCS CKNDLALVHY ACALKWFVSH GSTVCEICGN PAKNIRTSDF
KKVVVSLKDY EALRERTASG DPNPAQVHTS SGVDPDAVAA IRRQRLSEIS LWFSPHSNNN
NNNSSAAVSQ AVSEQPLNTF TEEVAPTENP ATKWAVEGTG ILLATGLLTV TLAWLIAPRV
GKKTARSGLH ILLGGICALT VVVFFRFIVL TRIKYGPARY WAILFVFWFL VFGIWASRTH
GAHTT
//
