ID A0A061DQ32_THECC Unreviewed; 356 AA.
AC A0A061DQ32;
DT 03-SEP-2014, integrated into UniProtKB/TrEMBL.
DT 03-SEP-2014, sequence version 1.
DT 27-MAR-2024, entry version 39.
DE RecName: Full=Transcription factor {ECO:0000256|RuleBase:RU369104};
DE Short=bHLH transcription factor {ECO:0000256|RuleBase:RU369104};
DE AltName: Full=Basic helix-loop-helix protein {ECO:0000256|RuleBase:RU369104};
GN ORFNames=TCM_004140 {ECO:0000313|EMBL:EOX94532.1};
OS Theobroma cacao (Cacao) (Cocoa).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma.
OX NCBI_TaxID=3641 {ECO:0000313|EMBL:EOX94532.1, ECO:0000313|Proteomes:UP000026915};
RN [1] {ECO:0000313|EMBL:EOX94532.1, ECO:0000313|Proteomes:UP000026915}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Matina 1-6 {ECO:0000313|Proteomes:UP000026915};
RX PubMed=23731509; DOI=10.1186/gb-2013-14-6-r53;
RA Motamayor J.C., Mockaitis K., Schmutz J., Haiminen N., Iii D.L.,
RA Cornejo O., Findley S.D., Zheng P., Utro F., Royaert S., Saski C.,
RA Jenkins J., Podicheti R., Zhao M., Scheffler B.E., Stack J.C., Feltus F.A.,
RA Mustiga G.M., Amores F., Phillips W., Marelli J.P., May G.D., Shapiro H.,
RA Ma J., Bustamante C.D., Schnell R.J., Main D., Gilbert D., Parida L.,
RA Kuhn D.N.;
RT "The genome sequence of the most widely cultivated cacao type and its use
RT to identify candidate genes regulating pod color.";
RL Genome Biol. 14:R53.1-R53.24(2013).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123,
CC ECO:0000256|RuleBase:RU369104}.
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DR EMBL; CM001879; EOX94531.1; -; Genomic_DNA.
DR EMBL; CM001879; EOX94532.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A061DQ32; -.
DR STRING; 3641.A0A061DQ32; -.
DR EnsemblPlants; EOX94531; EOX94531; TCM_004140.
DR EnsemblPlants; EOX94532; EOX94532; TCM_004140.
DR Gramene; EOX94531; EOX94531; TCM_004140.
DR Gramene; EOX94532; EOX94532; TCM_004140.
DR eggNOG; ENOG502QUEW; Eukaryota.
DR HOGENOM; CLU_021132_0_1_1; -.
DR InParanoid; A0A061DQ32; -.
DR OMA; AVVRISC; -.
DR Proteomes; UP000026915; Chromosome 1.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IBA:GO_Central.
DR GO; GO:0000976; F:transcription cis-regulatory region binding; IBA:GO_Central.
DR GO; GO:0010629; P:negative regulation of gene expression; IEA:EnsemblPlants.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IBA:GO_Central.
DR InterPro; IPR045084; AIB/MYC-like.
DR InterPro; IPR025610; MYC/MYB_N.
DR PANTHER; PTHR11514; MYC; 1.
DR PANTHER; PTHR11514:SF53; TRANSCRIPTION FACTOR BHLH3; 1.
DR Pfam; PF14215; bHLH-MYC_N; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Nucleus {ECO:0000256|RuleBase:RU369104};
KW Reference proteome {ECO:0000313|Proteomes:UP000026915};
KW Transcription {ECO:0000256|RuleBase:RU369104};
KW Transcription regulation {ECO:0000256|RuleBase:RU369104}.
FT DOMAIN 50..234
FT /note="Transcription factor MYC/MYB N-terminal"
FT /evidence="ECO:0000259|Pfam:PF14215"
FT REGION 321..356
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 333..356
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 356 AA; 38733 MW; 3B654A1770F4C6EA CRC64;
MGEKFWVNEE DKAKVESVLG AEACEFLISL ASKQVLSELV TRPPSDLGVQ QRLCQIVDGS
NWNYAIFWQV SSLKSGGSIL IWGDGHCRDP KLGGVGDAST SGDGKLEGVE DKNEVKKLVL
QKLHACFGGS EEDNYAAKLD GVSDMEMFYL TSMHFTFHCD SSYGPGESYK SSRSIWTSDV
NNCSDHYQSR SFLARSAGLQ TVVFIPVKSG VVELGSINLI PEEQNSVEMV NNVFGGSSSV
QTKTIPKIFG RELSLGGSKS RSISINFSPK VEDESGFTLE TYDVQALGSN QIYGNSSNGC
RSDDGEAKLF PQLLVGGFNA QARISGLEQP KDDSPSLPDE RKPRKRGSQP MGEKNH
//
