ID A0A061DS37_THECC Unreviewed; 497 AA.
AC A0A061DS37;
DT 03-SEP-2014, integrated into UniProtKB/TrEMBL.
DT 03-SEP-2014, sequence version 1.
DT 27-MAR-2024, entry version 49.
DE RecName: Full=Transcription factor {ECO:0000256|RuleBase:RU369104};
DE Short=bHLH transcription factor {ECO:0000256|RuleBase:RU369104};
DE AltName: Full=Basic helix-loop-helix protein {ECO:0000256|RuleBase:RU369104};
GN ORFNames=TCM_005064 {ECO:0000313|EMBL:EOX95614.1};
OS Theobroma cacao (Cacao) (Cocoa).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma.
OX NCBI_TaxID=3641 {ECO:0000313|EMBL:EOX95614.1, ECO:0000313|Proteomes:UP000026915};
RN [1] {ECO:0000313|EMBL:EOX95614.1, ECO:0000313|Proteomes:UP000026915}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Matina 1-6 {ECO:0000313|Proteomes:UP000026915};
RX PubMed=23731509; DOI=10.1186/gb-2013-14-6-r53;
RA Motamayor J.C., Mockaitis K., Schmutz J., Haiminen N., Iii D.L.,
RA Cornejo O., Findley S.D., Zheng P., Utro F., Royaert S., Saski C.,
RA Jenkins J., Podicheti R., Zhao M., Scheffler B.E., Stack J.C., Feltus F.A.,
RA Mustiga G.M., Amores F., Phillips W., Marelli J.P., May G.D., Shapiro H.,
RA Ma J., Bustamante C.D., Schnell R.J., Main D., Gilbert D., Parida L.,
RA Kuhn D.N.;
RT "The genome sequence of the most widely cultivated cacao type and its use
RT to identify candidate genes regulating pod color.";
RL Genome Biol. 14:R53.1-R53.24(2013).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123,
CC ECO:0000256|RuleBase:RU369104}.
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DR EMBL; CM001879; EOX95614.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A061DS37; -.
DR STRING; 3641.A0A061DS37; -.
DR EnsemblPlants; EOX95614; EOX95614; TCM_005064.
DR Gramene; EOX95614; EOX95614; TCM_005064.
DR eggNOG; ENOG502QS6Z; Eukaryota.
DR HOGENOM; CLU_021132_0_1_1; -.
DR InParanoid; A0A061DS37; -.
DR OMA; DMSMIDG; -.
DR Proteomes; UP000026915; Chromosome 1.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IBA:GO_Central.
DR GO; GO:0046983; F:protein dimerization activity; IEA:InterPro.
DR GO; GO:0000976; F:transcription cis-regulatory region binding; IBA:GO_Central.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IBA:GO_Central.
DR CDD; cd11449; bHLH_AtAIB_like; 1.
DR Gene3D; 4.10.280.10; Helix-loop-helix DNA-binding domain; 1.
DR InterPro; IPR045084; AIB/MYC-like.
DR InterPro; IPR011598; bHLH_dom.
DR InterPro; IPR036638; HLH_DNA-bd_sf.
DR InterPro; IPR025610; MYC/MYB_N.
DR PANTHER; PTHR11514; MYC; 1.
DR PANTHER; PTHR11514:SF40; TRANSCRIPTION FACTOR BHLH14; 1.
DR Pfam; PF14215; bHLH-MYC_N; 1.
DR Pfam; PF00010; HLH; 1.
DR SMART; SM00353; HLH; 1.
DR SUPFAM; SSF47459; HLH, helix-loop-helix DNA-binding domain; 1.
DR PROSITE; PS50888; BHLH; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125, ECO:0000313|EMBL:EOX95614.1};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242, ECO:0000256|RuleBase:RU369104};
KW Reference proteome {ECO:0000313|Proteomes:UP000026915};
KW Transcription {ECO:0000256|ARBA:ARBA00023163,
KW ECO:0000256|RuleBase:RU369104};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015,
KW ECO:0000256|RuleBase:RU369104}.
FT DOMAIN 316..365
FT /note="BHLH"
FT /evidence="ECO:0000259|PROSITE:PS50888"
FT REGION 250..326
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 393..416
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 355..386
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 254..270
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 271..286
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 310..326
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 497 AA; 55306 MW; 3612F7ADF7B6614B CRC64;
MEELIISPSS SSSLVSFSQE TPPSTLQQRL QFVIQSQQDW WAYAIFWQTS NDEHGRLFLT
WGDGHFQGTK DTSPKLGANI SNIPGLNNER RKVMKGIQAL IGDNHDIDMS MIDGTDITDA
EWFYVMSLTR SFSAGDGIPG KALSTGSLVW LTGAHELQFY NCERAREAQM HAIETLVCIP
TSCGVLELGS SEMIRENWGL VQQVKSVFGS DLIGLVPKQS NPNPNLTPGP IQFLDRNISF
ADIGIIAGVQ EEDASPDNRT KQENHNNQTK KDSTKPGQSS YVDSEHSDSD CPLLAMNNIE
KRTPKKRGRK PGLGRETPLN HVEAERQRRE KLNHRFYALR AVVPNVSRMD KASLLSDAVS
YINELKAKIE ELESQLQREC KKVKVEMVDA MDNQSTTTSV DQAARPSNSS SGTAGSGGLE
FDIKIMGNDA MIRVQSENVN YPSARLMIAL RDLEFQVHHA SMSCVNELML QDIVVRVPDG
LRTEEGLKSA LLRRLEQ
//
