ID A0A061DWD0_THECC Unreviewed; 867 AA.
AC A0A061DWD0;
DT 03-SEP-2014, integrated into UniProtKB/TrEMBL.
DT 03-SEP-2014, sequence version 1.
DT 27-MAR-2024, entry version 44.
DE SubName: Full=SNF2 domain-containing protein / helicase domain-containing protein {ECO:0000313|EMBL:EOX96381.1};
GN ORFNames=TCM_046992 {ECO:0000313|EMBL:EOX96381.1};
OS Theobroma cacao (Cacao) (Cocoa).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma.
OX NCBI_TaxID=3641 {ECO:0000313|EMBL:EOX96381.1, ECO:0000313|Proteomes:UP000026915};
RN [1] {ECO:0000313|EMBL:EOX96381.1, ECO:0000313|Proteomes:UP000026915}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Matina 1-6 {ECO:0000313|Proteomes:UP000026915};
RX PubMed=23731509; DOI=10.1186/gb-2013-14-6-r53;
RA Motamayor J.C., Mockaitis K., Schmutz J., Haiminen N., Iii D.L.,
RA Cornejo O., Findley S.D., Zheng P., Utro F., Royaert S., Saski C.,
RA Jenkins J., Podicheti R., Zhao M., Scheffler B.E., Stack J.C., Feltus F.A.,
RA Mustiga G.M., Amores F., Phillips W., Marelli J.P., May G.D., Shapiro H.,
RA Ma J., Bustamante C.D., Schnell R.J., Main D., Gilbert D., Parida L.,
RA Kuhn D.N.;
RT "The genome sequence of the most widely cultivated cacao type and its use
RT to identify candidate genes regulating pod color.";
RL Genome Biol. 14:R53.1-R53.24(2013).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- SIMILARITY: Belongs to the SNF2/RAD54 helicase family.
CC {ECO:0000256|ARBA:ARBA00007025}.
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DR EMBL; CM001879; EOX96381.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A061DWD0; -.
DR STRING; 3641.A0A061DWD0; -.
DR EnsemblPlants; EOX96381; EOX96381; TCM_046992.
DR Gramene; EOX96381; EOX96381; TCM_046992.
DR eggNOG; KOG0385; Eukaryota.
DR HOGENOM; CLU_000315_17_9_1; -.
DR InParanoid; A0A061DWD0; -.
DR OMA; FIVHCVD; -.
DR Proteomes; UP000026915; Chromosome 1.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR GO; GO:0008094; F:ATP-dependent activity, acting on DNA; IBA:GO_Central.
DR GO; GO:0140658; F:ATP-dependent chromatin remodeler activity; IEA:InterPro.
DR GO; GO:0003677; F:DNA binding; IBA:GO_Central.
DR GO; GO:0003678; F:DNA helicase activity; IEA:InterPro.
DR GO; GO:0006281; P:DNA repair; IEA:InterPro.
DR CDD; cd03331; Macro_Poa1p-like_SNF2; 1.
DR CDD; cd18793; SF2_C_SNF; 1.
DR Gene3D; 3.40.220.10; Leucine Aminopeptidase, subunit E, domain 1; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR Gene3D; 3.40.50.10810; Tandem AAA-ATPase domain; 1.
DR InterPro; IPR031053; ALC1.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR043472; Macro_dom-like.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR038718; SNF2-like_sf.
DR InterPro; IPR049730; SNF2/RAD54-like_C.
DR InterPro; IPR000330; SNF2_N.
DR PANTHER; PTHR47157; CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 1-LIKE; 1.
DR PANTHER; PTHR47157:SF1; CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 1-LIKE; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR Pfam; PF00176; SNF2-rel_dom; 1.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM00490; HELICc; 1.
DR SUPFAM; SSF52949; Macro domain-like; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
PE 3: Inferred from homology;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Helicase {ECO:0000313|EMBL:EOX96381.1};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000026915}.
FT DOMAIN 49..227
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
FT DOMAIN 369..546
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51194"
SQ SEQUENCE 867 AA; 97731 MW; F30B25BEE836D820 CRC64;
MNYEQRLKAA AKIVIAYDSR AGDTAVDCAE FGVTATLKPH QVDGVSWLIR RYVLGVNVVL
GDEMGLGKTL QAISFLSYLK VHQKSPGPFL VLCPLSVTDG WVSEIVKFTP KLEVLRYVGE
KEHRQSIRKT IYEHVEEKSS SSNVLSLPFD VLLTTYDIAL MDQDFLSQIP WHYAIIDEAQ
RLKNPSSVLY NVLIDRFLMP RRLLMTGTPI QNNLTELWAL MHFCMPSVFG TLNQFLSSFK
EAGDSSSDGT PSKTKEQFKS LKYILQAFML RRTKSKLIEC GNLVLPPLTE ITVMAPLLSL
QKKVYISILR KELPKLLALS SGSSSHQSLQ NIVIQLRKAC SHPYLFPGIE PEPYEEGEHL
VQGGGKLMVL DQLLKKLYDS GHRVLLFAQM THTLDILQDF LELRKYSYER LDGSIRAEER
FAAIRSFSKR SAEGSLNSES DRNAAFIFMI STRAGGVGLN LVAADTVIFY EQDWNPQVDK
QALQRAHRIG QMNHVLSINL VTEHSVEEVI MRRAERKLQL SHNVVGDHVM EQEGKENAGA
EMGDLRSIIF GLHMFDPTEI NNEKVDELKT SELSAMAEKV IAVRHKQTLG KFEINAGDLM
DGHDVIMKGS SSFCVDPGLD EASYLSWVEK FKAASQSGDN QIMELERRRN FPEDRHLKVE
AAKKKAEEKK KTRWEAHGYH SLSVQDPLPV DGDMMSDSGS VLFVYGDCTD PSKVCLSEPA
VIFSCIDNSG NWGHGGMFDA LAKLSASIPD AYERASEFQD LHLGDLHLIR INEDCEGNNT
PWWVALAVVQ SYNPRRKVPR SDISIPDLEC CLSKASFSAA ENSASIHMPR IGYQDGSDRS
QWYTVERLLR KYASIYGVKI FVYYYRR
//
