ID A0A061DY64_THECC Unreviewed; 458 AA.
AC A0A061DY64;
DT 03-SEP-2014, integrated into UniProtKB/TrEMBL.
DT 03-SEP-2014, sequence version 1.
DT 27-MAR-2024, entry version 50.
DE SubName: Full=Peptide chain release factor 1 isoform 1 {ECO:0000313|EMBL:EOX94973.1};
GN ORFNames=TCM_004560 {ECO:0000313|EMBL:EOX94973.1};
OS Theobroma cacao (Cacao) (Cocoa).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma.
OX NCBI_TaxID=3641 {ECO:0000313|EMBL:EOX94973.1, ECO:0000313|Proteomes:UP000026915};
RN [1] {ECO:0000313|EMBL:EOX94973.1, ECO:0000313|Proteomes:UP000026915}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Matina 1-6 {ECO:0000313|Proteomes:UP000026915};
RX PubMed=23731509; DOI=10.1186/gb-2013-14-6-r53;
RA Motamayor J.C., Mockaitis K., Schmutz J., Haiminen N., Iii D.L.,
RA Cornejo O., Findley S.D., Zheng P., Utro F., Royaert S., Saski C.,
RA Jenkins J., Podicheti R., Zhao M., Scheffler B.E., Stack J.C., Feltus F.A.,
RA Mustiga G.M., Amores F., Phillips W., Marelli J.P., May G.D., Shapiro H.,
RA Ma J., Bustamante C.D., Schnell R.J., Main D., Gilbert D., Parida L.,
RA Kuhn D.N.;
RT "The genome sequence of the most widely cultivated cacao type and its use
RT to identify candidate genes regulating pod color.";
RL Genome Biol. 14:R53.1-R53.24(2013).
CC -!- SIMILARITY: Belongs to the prokaryotic/mitochondrial release factor
CC family. {ECO:0000256|ARBA:ARBA00010835}.
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DR EMBL; CM001879; EOX94973.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A061DY64; -.
DR STRING; 3641.A0A061DY64; -.
DR EnsemblPlants; EOX94973; EOX94973; TCM_004560.
DR Gramene; EOX94973; EOX94973; TCM_004560.
DR eggNOG; KOG2726; Eukaryota.
DR HOGENOM; CLU_036856_0_7_1; -.
DR InParanoid; A0A061DY64; -.
DR OMA; DHRVGFK; -.
DR Proteomes; UP000026915; Chromosome 1.
DR GO; GO:0009507; C:chloroplast; IBA:GO_Central.
DR GO; GO:0005739; C:mitochondrion; IBA:GO_Central.
DR GO; GO:0003747; F:translation release factor activity; IEA:InterPro.
DR GO; GO:0009658; P:chloroplast organization; IBA:GO_Central.
DR GO; GO:0070126; P:mitochondrial translational termination; IBA:GO_Central.
DR GO; GO:0032544; P:plastid translation; IBA:GO_Central.
DR GO; GO:0010027; P:thylakoid membrane organization; IBA:GO_Central.
DR Gene3D; 3.30.160.20; -; 1.
DR Gene3D; 3.30.70.1660; -; 2.
DR Gene3D; 6.10.140.1950; -; 1.
DR InterPro; IPR005139; PCRF.
DR InterPro; IPR000352; Pep_chain_release_fac_I.
DR InterPro; IPR045853; Pep_chain_release_fac_I_sf.
DR PANTHER; PTHR43804; LD18447P; 1.
DR PANTHER; PTHR43804:SF8; PEPTIDE CHAIN RELEASE FACTOR APG3, CHLOROPLASTIC; 1.
DR Pfam; PF03462; PCRF; 1.
DR Pfam; PF00472; RF-1; 1.
DR SMART; SM00937; PCRF; 1.
DR SUPFAM; SSF75620; Release factor; 1.
DR PROSITE; PS00745; RF_PROK_I; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000026915}.
FT DOMAIN 295..311
FT /note="Prokaryotic-type class I peptide chain release
FT factors"
FT /evidence="ECO:0000259|PROSITE:PS00745"
SQ SEQUENCE 458 AA; 52105 MW; 7C21C7EE86C6F5E7 CRC64;
MNGLAMSSTA RMFTSFNHFP MRHRLAPQSR GLVVTRPWLT FRAPRIVCIA EPYLITKLES
AEKTWKELSV RLADPDVVSN HIEYQKLAQS MAELDEVVST FRRFKDCEKQ LEETKALSEE
EGTDEDMAEM IASEINSLSS QLKELEEKLK VLLLPSDPLD ARNIMLEVRA GTGGDEAGLW
AGDLVVIIYM AKKWKENFTV RMYQKYSERN SWKSTLVSYS EAEKGGFKTC VIEVKGNRVY
SKLKYESGVH RVQRVPQTEA QGRVHTSTAT VAIMPEADEV EVEIDPKDIE LTTARSGGAG
GQNVNKVETA VDLFHKPTGI RIFCTEERTQ LQNKNRALQL LRAKLYEIKV REQQEQIRSQ
RKSQVGTGAR AEKIRTYNYK LESNGLVQDI SIMSLVKTYE YYATIYQDNR VTDHRLKMNF
ELMSFLEGDI ENAVQACTAM EQKELLEELA ESVTATPS
//
