ID A0A061E2B6_THECC Unreviewed; 1118 AA.
AC A0A061E2B6;
DT 03-SEP-2014, integrated into UniProtKB/TrEMBL.
DT 03-SEP-2014, sequence version 1.
DT 27-MAR-2024, entry version 35.
DE SubName: Full=Transcription factor jumonji domain-containing protein, putative isoform 3 {ECO:0000313|EMBL:EOX99100.1};
GN ORFNames=TCM_007714 {ECO:0000313|EMBL:EOX99100.1};
OS Theobroma cacao (Cacao) (Cocoa).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma.
OX NCBI_TaxID=3641 {ECO:0000313|EMBL:EOX99100.1, ECO:0000313|Proteomes:UP000026915};
RN [1] {ECO:0000313|EMBL:EOX99100.1, ECO:0000313|Proteomes:UP000026915}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Matina 1-6 {ECO:0000313|Proteomes:UP000026915};
RX PubMed=23731509; DOI=10.1186/gb-2013-14-6-r53;
RA Motamayor J.C., Mockaitis K., Schmutz J., Haiminen N., Iii D.L.,
RA Cornejo O., Findley S.D., Zheng P., Utro F., Royaert S., Saski C.,
RA Jenkins J., Podicheti R., Zhao M., Scheffler B.E., Stack J.C., Feltus F.A.,
RA Mustiga G.M., Amores F., Phillips W., Marelli J.P., May G.D., Shapiro H.,
RA Ma J., Bustamante C.D., Schnell R.J., Main D., Gilbert D., Parida L.,
RA Kuhn D.N.;
RT "The genome sequence of the most widely cultivated cacao type and its use
RT to identify candidate genes regulating pod color.";
RL Genome Biol. 14:R53.1-R53.24(2013).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
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DR EMBL; CM001880; EOX99100.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A061E2B6; -.
DR EnsemblPlants; EOX99100; EOX99100; TCM_007714.
DR Gramene; EOX99100; EOX99100; TCM_007714.
DR HOGENOM; CLU_001811_2_1_1; -.
DR Proteomes; UP000026915; Chromosome 2.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0032454; F:histone H3K9 demethylase activity; IEA:InterPro.
DR CDD; cd02208; cupin_RmlC-like; 1.
DR Gene3D; 2.60.120.650; Cupin; 1.
DR InterPro; IPR045109; JHDM2-like.
DR InterPro; IPR003347; JmjC_dom.
DR InterPro; IPR018866; Znf-4CXXC_R1.
DR InterPro; IPR001841; Znf_RING.
DR PANTHER; PTHR12549; JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN; 1.
DR PANTHER; PTHR12549:SF72; LYSINE-SPECIFIC DEMETHYLASE JMJ25-LIKE; 1.
DR Pfam; PF02373; JmjC; 1.
DR Pfam; PF10497; zf-4CXXC_R1; 1.
DR SMART; SM00558; JmjC; 1.
DR SUPFAM; SSF51197; Clavaminate synthase-like; 1.
DR PROSITE; PS51184; JMJC; 1.
DR PROSITE; PS50089; ZF_RING_2; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00175};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000026915};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00175};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00175}.
FT DOMAIN 363..410
FT /note="RING-type"
FT /evidence="ECO:0000259|PROSITE:PS50089"
FT DOMAIN 807..1103
FT /note="JmjC"
FT /evidence="ECO:0000259|PROSITE:PS51184"
FT REGION 1..104
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 162..186
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 198..321
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 563..583
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 44..93
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 202..216
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 224..249
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 257..313
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 567..582
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1118 AA; 126174 MW; 975D6154AF872938 CRC64;
MARPRKRLKP ERAPGSCEGV PQSDGEVMGS KENCASAEDQ VEGINGKGQE EEDSEMDGDK
AGEVEGKEEG IERKDKKCGD LEGDGEGVAL KKPTKRGRKV KQATVSLKRG TMEIVKEENV
EGSSDFVAEK KEEVGEKLKE NGVQPKGEKK LSFVENLEIS NGEDGVSIKE EVDSGADGNG
QGNSGAVLKR RLRAVAKKVS YADVQESEDE GFSAKKRSRK GRQKEKVLKS EGQEYGNNEN
EDIEIPTKKR GRRGRQKRKV SESEDNEGKD VKEGGKVEQG GDLGADDGKK RSRRGAKNDG
KKMDKEVLGN GKSLEKLEES LGMNTKPTYS LRASRVRKAR EESVPYSKKR NFAKWIAEES
LMCHQCQRND KGRVVRCKLC KRKRYCIPCL TNWYPKMSED AIADACPVCR DNCTCKACLR
MTGLLKKLGK TLKLEFSDDE KVQHSRYLLQ ALLPYIEQFS QEQMKEKVIE SKIQGMLPEQ
IQLKQAVCLE DERVYCNNCR TSIVDFHRSC SNCNYDLCLT CCHEIRDGHL QGGQKEVIME
YADRGFSYLH GALQCSMSSE VGKSLDSPKE TNSKEHKAAT SRWKANENGS IPCAPKDLDG
CGNGLLELRC MFTENAIFEL TEKAEKIAKA LNLGNVLEVS NQQCPCYNSM GEVDTGNGKL
RKAAFREDAT DNYLYCPKAK DIQTGDLKHF QRHWANGEPV IVSDVLENIS GLSWEPMVMW
RAFRQITHTK HDQQLEVKAI DCLDWSEVMV NIHQFFKGYT DGPFDTKSWP QILKLKDWPP
SNEFEKLLPR HHVEFLRCLP FKEYTHSLSG ILNMATKLPE KSLKPDMGPK SYIAYGVAEE
LGRGDSVTRL HCDMSDAVNV LTHTAEVKLT PKELASIDNL KQRHHLQDQW ELFGMGSKVG
TNMPGDDSFD ISICDKQSSD RSGDQEGDVI VQQDCQDGYS SLNSNNMGRE FEMEKSGKAK
VDQEKCMENG RLYETSRNKI EEVEAVEGGA IWDIFRRQDV PKLQDYLKKH FGEFRYVHCC
PVSQVFHPIH DQTFFLTLDH KAKLKKEYGI EPWTFVQKLG EAVFIPAGCP HQVRNIKSCI
KVALDFVSPE NVGECVRLTE EFRVLPQDHR AREDKLED
//
