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Database: UniProt
Entry: A0A061E5P8_THECC
LinkDB: A0A061E5P8_THECC
Original site: A0A061E5P8_THECC 
ID   A0A061E5P8_THECC        Unreviewed;      1031 AA.
AC   A0A061E5P8;
DT   03-SEP-2014, integrated into UniProtKB/TrEMBL.
DT   03-SEP-2014, sequence version 1.
DT   24-JAN-2024, entry version 47.
DE   SubName: Full=DEAD/DEAH box helicase, putative isoform 2 {ECO:0000313|EMBL:EOY00291.1};
GN   ORFNames=TCM_010129 {ECO:0000313|EMBL:EOY00291.1};
OS   Theobroma cacao (Cacao) (Cocoa).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma.
OX   NCBI_TaxID=3641 {ECO:0000313|EMBL:EOY00291.1, ECO:0000313|Proteomes:UP000026915};
RN   [1] {ECO:0000313|EMBL:EOY00291.1, ECO:0000313|Proteomes:UP000026915}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Matina 1-6 {ECO:0000313|Proteomes:UP000026915};
RX   PubMed=23731509; DOI=10.1186/gb-2013-14-6-r53;
RA   Motamayor J.C., Mockaitis K., Schmutz J., Haiminen N., Iii D.L.,
RA   Cornejo O., Findley S.D., Zheng P., Utro F., Royaert S., Saski C.,
RA   Jenkins J., Podicheti R., Zhao M., Scheffler B.E., Stack J.C., Feltus F.A.,
RA   Mustiga G.M., Amores F., Phillips W., Marelli J.P., May G.D., Shapiro H.,
RA   Ma J., Bustamante C.D., Schnell R.J., Main D., Gilbert D., Parida L.,
RA   Kuhn D.N.;
RT   "The genome sequence of the most widely cultivated cacao type and its use
RT   to identify candidate genes regulating pod color.";
RL   Genome Biol. 14:R53.1-R53.24(2013).
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DR   EMBL; CM001880; EOY00291.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A061E5P8; -.
DR   EnsemblPlants; EOY00291; EOY00291; TCM_010129.
DR   Gramene; EOY00291; EOY00291; TCM_010129.
DR   HOGENOM; CLU_002902_4_0_1; -.
DR   Proteomes; UP000026915; Chromosome 2.
DR   GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR   GO; GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
DR   GO; GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
DR   GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR   CDD; cd18795; SF2_C_Ski2; 1.
DR   Gene3D; 1.10.3380.30; -; 1.
DR   Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR   InterPro; IPR011545; DEAD/DEAH_box_helicase_dom.
DR   InterPro; IPR014001; Helicase_ATP-bd.
DR   InterPro; IPR001650; Helicase_C.
DR   InterPro; IPR027417; P-loop_NTPase.
DR   InterPro; IPR012961; Ski2/MTR4_C.
DR   PANTHER; PTHR12131; ATP-DEPENDENT RNA AND DNA HELICASE; 1.
DR   PANTHER; PTHR12131:SF8; HELICASE SKI2W; 1.
DR   Pfam; PF00270; DEAD; 1.
DR   Pfam; PF08148; DSHCT; 1.
DR   Pfam; PF00271; Helicase_C; 1.
DR   SMART; SM00487; DEXDc; 1.
DR   SMART; SM01142; DSHCT; 1.
DR   SMART; SM00490; HELICc; 1.
DR   SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR   PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR   PROSITE; PS51194; HELICASE_CTER; 1.
PE   4: Predicted;
KW   ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW   Coiled coil {ECO:0000256|SAM:Coils};
KW   Helicase {ECO:0000256|ARBA:ARBA00022806, ECO:0000313|EMBL:EOY00291.1};
KW   Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW   Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW   Reference proteome {ECO:0000313|Proteomes:UP000026915}.
FT   DOMAIN          23..187
FT                   /note="Helicase ATP-binding"
FT                   /evidence="ECO:0000259|PROSITE:PS51192"
FT   DOMAIN          295..479
FT                   /note="Helicase C-terminal"
FT                   /evidence="ECO:0000259|PROSITE:PS51194"
FT   REGION          236..264
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COILED          523..585
FT                   /evidence="ECO:0000256|SAM:Coils"
FT   COMPBIAS        238..252
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   1031 AA;  115906 MW;  291C669029CEBB76 CRC64;
     MIDVDALADI YDFRIDKFQR IAIEAFLRGS SVVVSAPTSS GKTLIAEAAA VATVARGSRL
     FYTTPLKALS NQKFRQFRET FGDNNVGLLT GDSAVNKDAQ VLVLTTEILR NMLYNSVGMA
     SSGSGFFHVD VIVLDEVHYL SDISRGTVWE EIVIYCPKEV QLICLSATVA NPDELAGWIG
     QIHGKTELVT SSWRPVPLTW HFSTKTSLLP LLNEKGTHMN RKLSLNYLQL SASGVKSYRD
     DGSRRRNSRQ RGRNGSLDGI VSMSEQPLSK NDKNMICRSQ VPQVVDTLWH LKAKDMLPAI
     WFIFNRRGCD AAVQYVEDCS LLDDCEMSEV ELALKKFRLQ YPDAVRETAV KGLIRGVAAH
     HAGCLPLWKS FVEELFQRGL VKVVFATETL AAGINMPART AVISSLSKRT SSGRIQLSPN
     ELLQMAGRAG RRGIDEWGHV VIVQTPYEGA EECCKLLFSG VEPLVSQFTA SYGMVLNLLG
     GAKVTRRSNE SDELNALQGR RTLEEARKLV EQSFGNYLGS NVMLAAKEEL AKIEKEIEAL
     TSEISDDAID RKSRKLLSEV AYKEIADLQE ELRQEKRLRT ELRRRMELKR FSALKPLLKE
     FENGHLPFIC LQYRDSEGVQ NLVPAVYLGK VESLDGSKLK KMVSADDSFA MGSVGTELNA
     GEPDSHQDVE PTYYVALGSD NSWYLFTEKW IKTVYRTGFP DVALTQGDAL PREIMRTLLD
     KEEMQWEKVA DSELGGLWYT EGSLETWSWS LNVPVLSSLS ESDEVLHMSQ EYDESVEHYK
     EQRNKVARLK KKIARTEGFR EYKKILDMGR FTEEKIKRLK ARSNHLTNRM ERIEPSGWKE
     FVQISNVIHE TRALDINTHV IFPLGETAAA IRGENELWLA MVLRNKILLE LKPAQLAAVC
     ASLVSEGIKV RVWKNNNYIY EPSSTVLNVI SLLDEQRYSF MQLEEKHAVE IPCCLDGQFS
     GMVEAWASGL SWRELMMDCA MDEGDLARLL RRTIDLLAQI PKLPDIDPLL QKNATAASDV
     MDRPPISELA G
//
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