ID A0A061E5P8_THECC Unreviewed; 1031 AA.
AC A0A061E5P8;
DT 03-SEP-2014, integrated into UniProtKB/TrEMBL.
DT 03-SEP-2014, sequence version 1.
DT 24-JAN-2024, entry version 47.
DE SubName: Full=DEAD/DEAH box helicase, putative isoform 2 {ECO:0000313|EMBL:EOY00291.1};
GN ORFNames=TCM_010129 {ECO:0000313|EMBL:EOY00291.1};
OS Theobroma cacao (Cacao) (Cocoa).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma.
OX NCBI_TaxID=3641 {ECO:0000313|EMBL:EOY00291.1, ECO:0000313|Proteomes:UP000026915};
RN [1] {ECO:0000313|EMBL:EOY00291.1, ECO:0000313|Proteomes:UP000026915}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Matina 1-6 {ECO:0000313|Proteomes:UP000026915};
RX PubMed=23731509; DOI=10.1186/gb-2013-14-6-r53;
RA Motamayor J.C., Mockaitis K., Schmutz J., Haiminen N., Iii D.L.,
RA Cornejo O., Findley S.D., Zheng P., Utro F., Royaert S., Saski C.,
RA Jenkins J., Podicheti R., Zhao M., Scheffler B.E., Stack J.C., Feltus F.A.,
RA Mustiga G.M., Amores F., Phillips W., Marelli J.P., May G.D., Shapiro H.,
RA Ma J., Bustamante C.D., Schnell R.J., Main D., Gilbert D., Parida L.,
RA Kuhn D.N.;
RT "The genome sequence of the most widely cultivated cacao type and its use
RT to identify candidate genes regulating pod color.";
RL Genome Biol. 14:R53.1-R53.24(2013).
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DR EMBL; CM001880; EOY00291.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A061E5P8; -.
DR EnsemblPlants; EOY00291; EOY00291; TCM_010129.
DR Gramene; EOY00291; EOY00291; TCM_010129.
DR HOGENOM; CLU_002902_4_0_1; -.
DR Proteomes; UP000026915; Chromosome 2.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
DR GO; GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR CDD; cd18795; SF2_C_Ski2; 1.
DR Gene3D; 1.10.3380.30; -; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR InterPro; IPR011545; DEAD/DEAH_box_helicase_dom.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR012961; Ski2/MTR4_C.
DR PANTHER; PTHR12131; ATP-DEPENDENT RNA AND DNA HELICASE; 1.
DR PANTHER; PTHR12131:SF8; HELICASE SKI2W; 1.
DR Pfam; PF00270; DEAD; 1.
DR Pfam; PF08148; DSHCT; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM01142; DSHCT; 1.
DR SMART; SM00490; HELICc; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Helicase {ECO:0000256|ARBA:ARBA00022806, ECO:0000313|EMBL:EOY00291.1};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000026915}.
FT DOMAIN 23..187
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
FT DOMAIN 295..479
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51194"
FT REGION 236..264
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 523..585
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 238..252
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1031 AA; 115906 MW; 291C669029CEBB76 CRC64;
MIDVDALADI YDFRIDKFQR IAIEAFLRGS SVVVSAPTSS GKTLIAEAAA VATVARGSRL
FYTTPLKALS NQKFRQFRET FGDNNVGLLT GDSAVNKDAQ VLVLTTEILR NMLYNSVGMA
SSGSGFFHVD VIVLDEVHYL SDISRGTVWE EIVIYCPKEV QLICLSATVA NPDELAGWIG
QIHGKTELVT SSWRPVPLTW HFSTKTSLLP LLNEKGTHMN RKLSLNYLQL SASGVKSYRD
DGSRRRNSRQ RGRNGSLDGI VSMSEQPLSK NDKNMICRSQ VPQVVDTLWH LKAKDMLPAI
WFIFNRRGCD AAVQYVEDCS LLDDCEMSEV ELALKKFRLQ YPDAVRETAV KGLIRGVAAH
HAGCLPLWKS FVEELFQRGL VKVVFATETL AAGINMPART AVISSLSKRT SSGRIQLSPN
ELLQMAGRAG RRGIDEWGHV VIVQTPYEGA EECCKLLFSG VEPLVSQFTA SYGMVLNLLG
GAKVTRRSNE SDELNALQGR RTLEEARKLV EQSFGNYLGS NVMLAAKEEL AKIEKEIEAL
TSEISDDAID RKSRKLLSEV AYKEIADLQE ELRQEKRLRT ELRRRMELKR FSALKPLLKE
FENGHLPFIC LQYRDSEGVQ NLVPAVYLGK VESLDGSKLK KMVSADDSFA MGSVGTELNA
GEPDSHQDVE PTYYVALGSD NSWYLFTEKW IKTVYRTGFP DVALTQGDAL PREIMRTLLD
KEEMQWEKVA DSELGGLWYT EGSLETWSWS LNVPVLSSLS ESDEVLHMSQ EYDESVEHYK
EQRNKVARLK KKIARTEGFR EYKKILDMGR FTEEKIKRLK ARSNHLTNRM ERIEPSGWKE
FVQISNVIHE TRALDINTHV IFPLGETAAA IRGENELWLA MVLRNKILLE LKPAQLAAVC
ASLVSEGIKV RVWKNNNYIY EPSSTVLNVI SLLDEQRYSF MQLEEKHAVE IPCCLDGQFS
GMVEAWASGL SWRELMMDCA MDEGDLARLL RRTIDLLAQI PKLPDIDPLL QKNATAASDV
MDRPPISELA G
//