ID A0A061E7A1_THECC Unreviewed; 265 AA.
AC A0A061E7A1;
DT 03-SEP-2014, integrated into UniProtKB/TrEMBL.
DT 03-SEP-2014, sequence version 1.
DT 27-MAR-2024, entry version 43.
DE SubName: Full=RING/FYVE/PHD zinc finger superfamily protein isoform 1 {ECO:0000313|EMBL:EOY00895.1};
GN ORFNames=TCM_010811 {ECO:0000313|EMBL:EOY00895.1};
OS Theobroma cacao (Cacao) (Cocoa).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma.
OX NCBI_TaxID=3641 {ECO:0000313|EMBL:EOY00895.1, ECO:0000313|Proteomes:UP000026915};
RN [1] {ECO:0000313|EMBL:EOY00895.1, ECO:0000313|Proteomes:UP000026915}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Matina 1-6 {ECO:0000313|Proteomes:UP000026915};
RX PubMed=23731509; DOI=10.1186/gb-2013-14-6-r53;
RA Motamayor J.C., Mockaitis K., Schmutz J., Haiminen N., Iii D.L.,
RA Cornejo O., Findley S.D., Zheng P., Utro F., Royaert S., Saski C.,
RA Jenkins J., Podicheti R., Zhao M., Scheffler B.E., Stack J.C., Feltus F.A.,
RA Mustiga G.M., Amores F., Phillips W., Marelli J.P., May G.D., Shapiro H.,
RA Ma J., Bustamante C.D., Schnell R.J., Main D., Gilbert D., Parida L.,
RA Kuhn D.N.;
RT "The genome sequence of the most widely cultivated cacao type and its use
RT to identify candidate genes regulating pod color.";
RL Genome Biol. 14:R53.1-R53.24(2013).
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DR EMBL; CM001880; EOY00895.1; -; Genomic_DNA.
DR EMBL; CM001880; EOY00896.1; -; Genomic_DNA.
DR EMBL; CM001880; EOY00897.1; -; Genomic_DNA.
DR RefSeq; XP_007045063.1; XM_007045001.2.
DR RefSeq; XP_017971142.1; XM_018115653.1.
DR RefSeq; XP_017971143.1; XM_018115654.1.
DR AlphaFoldDB; A0A061E7A1; -.
DR STRING; 3641.A0A061E7A1; -.
DR EnsemblPlants; EOY00895; EOY00895; TCM_010811.
DR EnsemblPlants; EOY00896; EOY00896; TCM_010811.
DR EnsemblPlants; EOY00897; EOY00897; TCM_010811.
DR EnsemblPlants; Tc02v2_t024180.1; Tc02v2_p024180.1; Tc02v2_g024180.
DR EnsemblPlants; Tc02v2_t024180.2; Tc02v2_p024180.2; Tc02v2_g024180.
DR EnsemblPlants; Tc02v2_t024180.3; Tc02v2_p024180.3; Tc02v2_g024180.
DR GeneID; 18609734; -.
DR Gramene; EOY00895; EOY00895; TCM_010811.
DR Gramene; EOY00896; EOY00896; TCM_010811.
DR Gramene; EOY00897; EOY00897; TCM_010811.
DR Gramene; Tc02v2_t024180.1; Tc02v2_p024180.1; Tc02v2_g024180.
DR Gramene; Tc02v2_t024180.2; Tc02v2_p024180.2; Tc02v2_g024180.
DR Gramene; Tc02v2_t024180.3; Tc02v2_p024180.3; Tc02v2_g024180.
DR KEGG; tcc:18609734; -.
DR eggNOG; KOG1609; Eukaryota.
DR HOGENOM; CLU_061276_0_0_1; -.
DR InParanoid; A0A061E7A1; -.
DR OMA; SRNRSMQ; -.
DR OrthoDB; 316487at2759; -.
DR Proteomes; UP000026915; Chromosome 2.
DR GO; GO:0016020; C:membrane; IBA:GO_Central.
DR GO; GO:0004842; F:ubiquitin-protein transferase activity; IBA:GO_Central.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0016567; P:protein ubiquitination; IBA:GO_Central.
DR CDD; cd16495; RING_CH-C4HC3_MARCH; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR022143; DUF3675.
DR InterPro; IPR033275; MARCH-like.
DR InterPro; IPR001841; Znf_RING.
DR InterPro; IPR011016; Znf_RING-CH.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR23012; RING/FYVE/PHD ZINC FINGER DOMAIN-CONTAINING; 1.
DR PANTHER; PTHR23012:SF93; RING_FYVE_PHD ZINC FINGER SUPERFAMILY PROTEIN; 1.
DR Pfam; PF12428; DUF3675; 1.
DR Pfam; PF12906; RINGv; 1.
DR SMART; SM00744; RINGv; 1.
DR SUPFAM; SSF57850; RING/U-box; 1.
DR PROSITE; PS50089; ZF_RING_2; 1.
DR PROSITE; PS51292; ZF_RING_CH; 1.
PE 4: Predicted;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00175};
KW Reference proteome {ECO:0000313|Proteomes:UP000026915};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00175};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00175}.
FT TRANSMEM 171..190
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 202..223
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 51..111
FT /note="RING-CH-type"
FT /evidence="ECO:0000259|PROSITE:PS51292"
FT DOMAIN 59..105
FT /note="RING-type"
FT /evidence="ECO:0000259|PROSITE:PS50089"
FT REGION 240..265
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 265 AA; 30182 MW; 535FCECAC06CD51B CRC64;
MGDHFVLLVD RLLTESTLEA AIESRNKSLQ ATASAVDDTE PVNSSPKVDL SSPRKIVECR
ICQDEDEDSN METPCSCCGS LKYAHRRCVQ RWCNEKGNTT CEICHQHFKP GYTAPPPLFQ
IGSIPMNLRG NWEISRRELN SSRFIAVVST DRNLLDSGYD EYSVSNTRSF ICYRTVAIIF
MLLLIMRHTL PVMLSRINGY SFLLFMLFVL RTVGIVLPLY VLVKVVTGFY RHRQQQETPA
SLFTQSDEEP EHSSVQPQSH IINVR
//
