ID A0A061EA92_THECC Unreviewed; 314 AA.
AC A0A061EA92;
DT 03-SEP-2014, integrated into UniProtKB/TrEMBL.
DT 03-SEP-2014, sequence version 1.
DT 27-MAR-2024, entry version 35.
DE SubName: Full=RING/FYVE/PHD zinc finger superfamily protein isoform 3 {ECO:0000313|EMBL:EOY01930.1};
GN ORFNames=TCM_011709 {ECO:0000313|EMBL:EOY01930.1};
OS Theobroma cacao (Cacao) (Cocoa).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma.
OX NCBI_TaxID=3641 {ECO:0000313|EMBL:EOY01930.1, ECO:0000313|Proteomes:UP000026915};
RN [1] {ECO:0000313|EMBL:EOY01930.1, ECO:0000313|Proteomes:UP000026915}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Matina 1-6 {ECO:0000313|Proteomes:UP000026915};
RX PubMed=23731509; DOI=10.1186/gb-2013-14-6-r53;
RA Motamayor J.C., Mockaitis K., Schmutz J., Haiminen N., Iii D.L.,
RA Cornejo O., Findley S.D., Zheng P., Utro F., Royaert S., Saski C.,
RA Jenkins J., Podicheti R., Zhao M., Scheffler B.E., Stack J.C., Feltus F.A.,
RA Mustiga G.M., Amores F., Phillips W., Marelli J.P., May G.D., Shapiro H.,
RA Ma J., Bustamante C.D., Schnell R.J., Main D., Gilbert D., Parida L.,
RA Kuhn D.N.;
RT "The genome sequence of the most widely cultivated cacao type and its use
RT to identify candidate genes regulating pod color.";
RL Genome Biol. 14:R53.1-R53.24(2013).
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DR EMBL; CM001880; EOY01930.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A061EA92; -.
DR EnsemblPlants; EOY01930; EOY01930; TCM_011709.
DR Gramene; EOY01930; EOY01930; TCM_011709.
DR Proteomes; UP000026915; Chromosome 2.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR CDD; cd16495; RING_CH-C4HC3_MARCH; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR022143; DUF3675.
DR InterPro; IPR033275; MARCH-like.
DR InterPro; IPR011016; Znf_RING-CH.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR23012; RING/FYVE/PHD ZINC FINGER DOMAIN-CONTAINING; 1.
DR PANTHER; PTHR23012:SF175; RING_FYVE_PHD ZINC FINGER SUPERFAMILY PROTEIN; 1.
DR Pfam; PF12428; DUF3675; 1.
DR Pfam; PF12906; RINGv; 1.
DR SMART; SM00744; RINGv; 1.
DR SUPFAM; SSF57850; RING/U-box; 1.
DR PROSITE; PS51292; ZF_RING_CH; 1.
PE 4: Predicted;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000026915};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 177..196
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 208..232
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 56..116
FT /note="RING-CH-type"
FT /evidence="ECO:0000259|PROSITE:PS51292"
FT REGION 1..58
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:EOY01930.1"
SQ SEQUENCE 314 AA; 34466 MW; 13E13E1459BB4872 CRC64;
QIPPVFSARR PVPVQSLESE AGPSTEISGP SCSVEDKEKE VVRGGEEEED EEEEEEPLIH
AAECRICQEE DSIKNLETPC ACSGSLKYAH RKCVQHWCNE KGDIICEICH QPYQPGYTAP
PRPHTEETAI DIGGGWTISG TPLDLRDPRL LAIAEAERQF LEAEYDEYAA SNASGAAFCR
SAALILMALL LLRHALTVPD ADGDDDVSTF FSLFLLRAAG FLLPCYIMAW AISILQRRRQ
RQEAAALAAT QVAFVLQSGQ RRGMQFTIAS GPAATPHQAD CGWTHCTTEE TVEGRLLDEL
GPLVLNQSTE KLQL
//