ID A0A061EDL3_THECC Unreviewed; 299 AA.
AC A0A061EDL3;
DT 03-SEP-2014, integrated into UniProtKB/TrEMBL.
DT 03-SEP-2014, sequence version 1.
DT 27-MAR-2024, entry version 34.
DE SubName: Full=RNA-binding family protein isoform 6 {ECO:0000313|EMBL:EOY02512.1};
GN ORFNames=TCM_016971 {ECO:0000313|EMBL:EOY02512.1};
OS Theobroma cacao (Cacao) (Cocoa).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma.
OX NCBI_TaxID=3641 {ECO:0000313|EMBL:EOY02512.1, ECO:0000313|Proteomes:UP000026915};
RN [1] {ECO:0000313|EMBL:EOY02512.1, ECO:0000313|Proteomes:UP000026915}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Matina 1-6 {ECO:0000313|Proteomes:UP000026915};
RX PubMed=23731509; DOI=10.1186/gb-2013-14-6-r53;
RA Motamayor J.C., Mockaitis K., Schmutz J., Haiminen N., Iii D.L.,
RA Cornejo O., Findley S.D., Zheng P., Utro F., Royaert S., Saski C.,
RA Jenkins J., Podicheti R., Zhao M., Scheffler B.E., Stack J.C., Feltus F.A.,
RA Mustiga G.M., Amores F., Phillips W., Marelli J.P., May G.D., Shapiro H.,
RA Ma J., Bustamante C.D., Schnell R.J., Main D., Gilbert D., Parida L.,
RA Kuhn D.N.;
RT "The genome sequence of the most widely cultivated cacao type and its use
RT to identify candidate genes regulating pod color.";
RL Genome Biol. 14:R53.1-R53.24(2013).
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DR EMBL; CM001882; EOY02512.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A061EDL3; -.
DR EnsemblPlants; EOY02512; EOY02512; TCM_016971.
DR Gramene; EOY02512; EOY02512; TCM_016971.
DR HOGENOM; CLU_012062_1_2_1; -.
DR Proteomes; UP000026915; Chromosome 4.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR Gene3D; 3.30.70.330; -; 2.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR000504; RRM_dom.
DR PANTHER; PTHR48033; RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN; 1.
DR PANTHER; PTHR48033:SF5; RRM DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF00076; RRM_1; 1.
DR SMART; SM00360; RRM; 1.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 2.
DR PROSITE; PS50102; RRM; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000026915};
KW RNA-binding {ECO:0000256|PROSITE-ProRule:PRU00176}.
FT DOMAIN 58..136
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT REGION 130..152
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 299 AA; 31116 MW; B153DCAFBDFA3DC2 CRC64;
MKDRKTGQPR GFGFVTYAEP SVVDKVIEDT HIINGKQVVE IKRTIPKGAA GSKDFKTRKI
FVGGIPSSVS EDEFKDFFMQ YGEVKEHQIM RDHATNRSRG FGFITFETEH AVDDLLAKGN
KVDFAGAQVE IKRAEPKKPN PPPAPSKRYN DSRTAYGSGF GDAYGRYGGG GFGSGGYRAS
GAYGGRAGGY GGYGVGEFGG YGGYAGGMGP FRGEPSLGYS GRYGGNFNRG YDMGSGYGGP
GEIYGGYGAG ATGGGYASSY DTGLGGGYGA AGGGAGNSFY GSRGGYSGAG SGRYHPYGR
//
