ID A0A061EFS4_THECC Unreviewed; 542 AA.
AC A0A061EFS4;
DT 03-SEP-2014, integrated into UniProtKB/TrEMBL.
DT 03-SEP-2014, sequence version 1.
DT 24-JAN-2024, entry version 34.
DE SubName: Full=RNA-binding KH domain-containing protein isoform 2 {ECO:0000313|EMBL:EOY03508.1};
GN ORFNames=TCM_018609 {ECO:0000313|EMBL:EOY03508.1};
OS Theobroma cacao (Cacao) (Cocoa).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma.
OX NCBI_TaxID=3641 {ECO:0000313|EMBL:EOY03508.1, ECO:0000313|Proteomes:UP000026915};
RN [1] {ECO:0000313|EMBL:EOY03508.1, ECO:0000313|Proteomes:UP000026915}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Matina 1-6 {ECO:0000313|Proteomes:UP000026915};
RX PubMed=23731509; DOI=10.1186/gb-2013-14-6-r53;
RA Motamayor J.C., Mockaitis K., Schmutz J., Haiminen N., Iii D.L.,
RA Cornejo O., Findley S.D., Zheng P., Utro F., Royaert S., Saski C.,
RA Jenkins J., Podicheti R., Zhao M., Scheffler B.E., Stack J.C., Feltus F.A.,
RA Mustiga G.M., Amores F., Phillips W., Marelli J.P., May G.D., Shapiro H.,
RA Ma J., Bustamante C.D., Schnell R.J., Main D., Gilbert D., Parida L.,
RA Kuhn D.N.;
RT "The genome sequence of the most widely cultivated cacao type and its use
RT to identify candidate genes regulating pod color.";
RL Genome Biol. 14:R53.1-R53.24(2013).
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DR EMBL; CM001882; EOY03508.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A061EFS4; -.
DR EnsemblPlants; EOY03508; EOY03508; TCM_018609.
DR Gramene; EOY03508; EOY03508; TCM_018609.
DR Proteomes; UP000026915; Chromosome 4.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR CDD; cd22459; KH-I_PEPPER_rpt1_like; 2.
DR CDD; cd22460; KH-I_PEPPER_rpt2_like; 2.
DR Gene3D; 3.30.310.210; -; 2.
DR InterPro; IPR004087; KH_dom.
DR InterPro; IPR004088; KH_dom_type_1.
DR InterPro; IPR036612; KH_dom_type_1_sf.
DR PANTHER; PTHR10288; KH DOMAIN CONTAINING RNA BINDING PROTEIN; 1.
DR PANTHER; PTHR10288:SF243; RNA-BINDING KH DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF00013; KH_1; 4.
DR SMART; SM00322; KH; 4.
DR SUPFAM; SSF54791; Eukaryotic type KH-domain (KH-domain type I); 4.
DR PROSITE; PS50084; KH_TYPE_1; 4.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000026915};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW RNA-binding {ECO:0000256|PROSITE-ProRule:PRU00117}.
FT DOMAIN 41..124
FT /note="K Homology"
FT /evidence="ECO:0000259|SMART:SM00322"
FT DOMAIN 137..212
FT /note="K Homology"
FT /evidence="ECO:0000259|SMART:SM00322"
FT DOMAIN 280..356
FT /note="K Homology"
FT /evidence="ECO:0000259|SMART:SM00322"
FT DOMAIN 366..441
FT /note="K Homology"
FT /evidence="ECO:0000259|SMART:SM00322"
FT REGION 1..36
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 469..492
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..23
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 542 AA; 58116 MW; 6A9E239EE2990CAB CRC64;
MAGQRNSYGK RAHSQSDYSE NGSNKRRNPG DDREQFVIDS EDTVYRYLCP VRKIGSIIGR
GGEIVKQLRA ETKSKIRIGE TVPGSEERVV TIYSSRDETN ALEDGNNFVS PAQDALFRVH
DKVVAEDLHG DEDSEGHQVT ARLLVPSDQI GCVIGKGGQI VQNIRSETGA QIRILKDEHL
PSCALSTDEL VQISGEATVV KKALHQIASR LHENPSRSQH LLASAMSNAY PAGGALLGPA
AGAQIVGIAP LVGPYGGYKG DTGEWPRSLY SAPRDEMSSK EFSLRLVCPT ANIGGVIGKG
GAIINQIRQE SGAVIKVDSS ATEGDDCLIT VSAKEFFEDT YSPTIEAAVR LQPRCSEKVE
RDSGIISFTT RLLVPTSRIG CLIGKGGSIV TEMRRITKAN IRILSKESLP KIASEDDEMV
QIAGDLDVAK DALVQITTRL RANVFDREGA VSALVPVLPY LPVPTEGTDS LSYESRDSKR
HGRGHSYSGG YGSSDLGASD SYGSYGGPQI GGSSSAYGAY GGYSSGRGGP SGLRERLHYY
YI
//