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Database: UniProt
Entry: A0A061EFS4_THECC
LinkDB: A0A061EFS4_THECC
Original site: A0A061EFS4_THECC 
ID   A0A061EFS4_THECC        Unreviewed;       542 AA.
AC   A0A061EFS4;
DT   03-SEP-2014, integrated into UniProtKB/TrEMBL.
DT   03-SEP-2014, sequence version 1.
DT   24-JAN-2024, entry version 34.
DE   SubName: Full=RNA-binding KH domain-containing protein isoform 2 {ECO:0000313|EMBL:EOY03508.1};
GN   ORFNames=TCM_018609 {ECO:0000313|EMBL:EOY03508.1};
OS   Theobroma cacao (Cacao) (Cocoa).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma.
OX   NCBI_TaxID=3641 {ECO:0000313|EMBL:EOY03508.1, ECO:0000313|Proteomes:UP000026915};
RN   [1] {ECO:0000313|EMBL:EOY03508.1, ECO:0000313|Proteomes:UP000026915}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Matina 1-6 {ECO:0000313|Proteomes:UP000026915};
RX   PubMed=23731509; DOI=10.1186/gb-2013-14-6-r53;
RA   Motamayor J.C., Mockaitis K., Schmutz J., Haiminen N., Iii D.L.,
RA   Cornejo O., Findley S.D., Zheng P., Utro F., Royaert S., Saski C.,
RA   Jenkins J., Podicheti R., Zhao M., Scheffler B.E., Stack J.C., Feltus F.A.,
RA   Mustiga G.M., Amores F., Phillips W., Marelli J.P., May G.D., Shapiro H.,
RA   Ma J., Bustamante C.D., Schnell R.J., Main D., Gilbert D., Parida L.,
RA   Kuhn D.N.;
RT   "The genome sequence of the most widely cultivated cacao type and its use
RT   to identify candidate genes regulating pod color.";
RL   Genome Biol. 14:R53.1-R53.24(2013).
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DR   EMBL; CM001882; EOY03508.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A061EFS4; -.
DR   EnsemblPlants; EOY03508; EOY03508; TCM_018609.
DR   Gramene; EOY03508; EOY03508; TCM_018609.
DR   Proteomes; UP000026915; Chromosome 4.
DR   GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR   CDD; cd22459; KH-I_PEPPER_rpt1_like; 2.
DR   CDD; cd22460; KH-I_PEPPER_rpt2_like; 2.
DR   Gene3D; 3.30.310.210; -; 2.
DR   InterPro; IPR004087; KH_dom.
DR   InterPro; IPR004088; KH_dom_type_1.
DR   InterPro; IPR036612; KH_dom_type_1_sf.
DR   PANTHER; PTHR10288; KH DOMAIN CONTAINING RNA BINDING PROTEIN; 1.
DR   PANTHER; PTHR10288:SF243; RNA-BINDING KH DOMAIN-CONTAINING PROTEIN; 1.
DR   Pfam; PF00013; KH_1; 4.
DR   SMART; SM00322; KH; 4.
DR   SUPFAM; SSF54791; Eukaryotic type KH-domain (KH-domain type I); 4.
DR   PROSITE; PS50084; KH_TYPE_1; 4.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000026915};
KW   Repeat {ECO:0000256|ARBA:ARBA00022737};
KW   RNA-binding {ECO:0000256|PROSITE-ProRule:PRU00117}.
FT   DOMAIN          41..124
FT                   /note="K Homology"
FT                   /evidence="ECO:0000259|SMART:SM00322"
FT   DOMAIN          137..212
FT                   /note="K Homology"
FT                   /evidence="ECO:0000259|SMART:SM00322"
FT   DOMAIN          280..356
FT                   /note="K Homology"
FT                   /evidence="ECO:0000259|SMART:SM00322"
FT   DOMAIN          366..441
FT                   /note="K Homology"
FT                   /evidence="ECO:0000259|SMART:SM00322"
FT   REGION          1..36
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          469..492
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1..23
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   542 AA;  58116 MW;  6A9E239EE2990CAB CRC64;
     MAGQRNSYGK RAHSQSDYSE NGSNKRRNPG DDREQFVIDS EDTVYRYLCP VRKIGSIIGR
     GGEIVKQLRA ETKSKIRIGE TVPGSEERVV TIYSSRDETN ALEDGNNFVS PAQDALFRVH
     DKVVAEDLHG DEDSEGHQVT ARLLVPSDQI GCVIGKGGQI VQNIRSETGA QIRILKDEHL
     PSCALSTDEL VQISGEATVV KKALHQIASR LHENPSRSQH LLASAMSNAY PAGGALLGPA
     AGAQIVGIAP LVGPYGGYKG DTGEWPRSLY SAPRDEMSSK EFSLRLVCPT ANIGGVIGKG
     GAIINQIRQE SGAVIKVDSS ATEGDDCLIT VSAKEFFEDT YSPTIEAAVR LQPRCSEKVE
     RDSGIISFTT RLLVPTSRIG CLIGKGGSIV TEMRRITKAN IRILSKESLP KIASEDDEMV
     QIAGDLDVAK DALVQITTRL RANVFDREGA VSALVPVLPY LPVPTEGTDS LSYESRDSKR
     HGRGHSYSGG YGSSDLGASD SYGSYGGPQI GGSSSAYGAY GGYSSGRGGP SGLRERLHYY
     YI
//
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