ID A0A061EW50_THECC Unreviewed; 1337 AA.
AC A0A061EW50;
DT 03-SEP-2014, integrated into UniProtKB/TrEMBL.
DT 03-SEP-2014, sequence version 1.
DT 24-JAN-2024, entry version 40.
DE RecName: Full=Condensin-1 complex subunit CAP-D2 {ECO:0000256|PIRNR:PIRNR017127};
GN ORFNames=TCM_024372 {ECO:0000313|EMBL:EOY09036.1};
OS Theobroma cacao (Cacao) (Cocoa).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma.
OX NCBI_TaxID=3641 {ECO:0000313|EMBL:EOY09036.1, ECO:0000313|Proteomes:UP000026915};
RN [1] {ECO:0000313|EMBL:EOY09036.1, ECO:0000313|Proteomes:UP000026915}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Matina 1-6 {ECO:0000313|Proteomes:UP000026915};
RX PubMed=23731509; DOI=10.1186/gb-2013-14-6-r53;
RA Motamayor J.C., Mockaitis K., Schmutz J., Haiminen N., Iii D.L.,
RA Cornejo O., Findley S.D., Zheng P., Utro F., Royaert S., Saski C.,
RA Jenkins J., Podicheti R., Zhao M., Scheffler B.E., Stack J.C., Feltus F.A.,
RA Mustiga G.M., Amores F., Phillips W., Marelli J.P., May G.D., Shapiro H.,
RA Ma J., Bustamante C.D., Schnell R.J., Main D., Gilbert D., Parida L.,
RA Kuhn D.N.;
RT "The genome sequence of the most widely cultivated cacao type and its use
RT to identify candidate genes regulating pod color.";
RL Genome Biol. 14:R53.1-R53.24(2013).
CC -!- FUNCTION: Regulatory subunit of the condensin complex, a complex
CC required for conversion of interphase chromatin into mitotic-like
CC condense chromosomes. The condensin complex probably introduces
CC positive supercoils into relaxed DNA in the presence of type I
CC topoisomerases and converts nicked DNA into positive knotted forms in
CC the presence of type II topoisomerases.
CC {ECO:0000256|PIRNR:PIRNR017127}.
CC -!- SUBCELLULAR LOCATION: Chromosome {ECO:0000256|ARBA:ARBA00004286}.
CC Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- SIMILARITY: Belongs to the CND1 (condensin subunit 1) family.
CC {ECO:0000256|ARBA:ARBA00009606, ECO:0000256|PIRNR:PIRNR017127}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; CM001883; EOY09036.1; -; Genomic_DNA.
DR EnsemblPlants; EOY09036; EOY09036; TCM_024372.
DR Gramene; EOY09036; EOY09036; TCM_024372.
DR Proteomes; UP000026915; Chromosome 5.
DR GO; GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0051301; P:cell division; IEA:UniProtKB-KW.
DR GO; GO:0007076; P:mitotic chromosome condensation; IEA:InterPro.
DR Gene3D; 1.25.10.10; Leucine-rich Repeat Variant; 2.
DR InterPro; IPR011989; ARM-like.
DR InterPro; IPR016024; ARM-type_fold.
DR InterPro; IPR026971; CND1/NCAPD3.
DR InterPro; IPR032682; Cnd1_C.
DR InterPro; IPR007673; Condensin_cplx_su1.
DR InterPro; IPR024324; Condensin_cplx_su1_N.
DR PANTHER; PTHR14222; CONDENSIN; 1.
DR PANTHER; PTHR14222:SF2; CONDENSIN COMPLEX SUBUNIT 1; 1.
DR Pfam; PF12717; Cnd1; 1.
DR Pfam; PF12922; Cnd1_N; 1.
DR PIRSF; PIRSF017127; Condensin_D2; 1.
DR SUPFAM; SSF48371; ARM repeat; 1.
PE 3: Inferred from homology;
KW Cell cycle {ECO:0000256|ARBA:ARBA00023306, ECO:0000256|PIRNR:PIRNR017127};
KW Cell division {ECO:0000256|ARBA:ARBA00022618,
KW ECO:0000256|PIRNR:PIRNR017127}; Chromosome {ECO:0000256|ARBA:ARBA00022454};
KW DNA condensation {ECO:0000256|ARBA:ARBA00023067,
KW ECO:0000256|PIRNR:PIRNR017127};
KW Mitosis {ECO:0000256|ARBA:ARBA00022776, ECO:0000256|PIRNR:PIRNR017127};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000026915}.
FT DOMAIN 85..247
FT /note="Condensin complex subunit 1 N-terminal"
FT /evidence="ECO:0000259|Pfam:PF12922"
FT DOMAIN 984..1144
FT /note="Condensin complex subunit 1 C-terminal"
FT /evidence="ECO:0000259|Pfam:PF12717"
FT REGION 1225..1249
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1262..1337
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1306..1322
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1337 AA; 148728 MW; 92EDAB573F3B7499 CRC64;
MAPHFVFPPN LRALEEQEED EHQHNRLSVQ NPIDLDPLRP AELEEFVKGV SFDLSDKELF
CIEEQDVFDR VYTLVRSFSS LTPSCKFILV ESLRSNLSVL LPNVDSLVRV SQGQDDNETP
MLDRVTSHRN AFKIYTFFLL HIILAEEFNN GSSNNPKVTA SSRKKQPVNL WNWELQRGRM
LNLIANSLEI NLALLFGSAD PDENYLSFIV KNSFSMFENT MLLKDSETKD ALCRIIGACA
TKYHYTEQSS ASIMHLIHKY DFVVIHMADA VALAEKKYGD GTLAISLIRE IGRTNPKAYV
KDTAGAENVG RFLVELADRL PKLMSTNIGL LVPHFGGESY KIRNALVGVL GKLVAKAFKD
VEGEVSSKSV RLRTKQAMLE ILLERCRDVS AYTRSRVLQV WAELCEEHSV SIGLWNEVAT
VAAGRLEDKS AIVRKSTLNL LIMMLQHNPF GPQLRIASFE ATLEQYKKKL NELEPDKLSE
GMKDGVHSDN DSCNDEGEVD NANAEEVANH QSESLTDSLP HMEQEIAHKD SSVPDVGNLE
QTRALVASLE AGLKFSKCIS ATMPTLVQLM ASSSATDVEN TILLLMRCRQ FQIDGAEACL
RKMLPLVFSQ DKSIYEAVEN AFVTIYIRKN LVETAKNLLN LAIDSNVGDL AALEFIVGAL
VSKGDISSGV ISALWDLFCF NVNGTTAEQS RGALAILCMA AKSSTEILGS HLQDIIDIGF
GRWAKVEPLL ARTACIAIQR LSEEDKKKLL LSNGSRIFGI LESLITGFGL PDNIWYAAAD
KAIGAVYMIH PTPENLAADL VKKSLSSVID GSTVDALHND INSGTCSVLT TVQVAKLSRY
LFVTSHVAMN QLVYVESCVR KIQKQKSNKE KVDAEGTANA ETQKDSSINA ELGLAASEDA
VLDTLAERAE KEIVSSGSSE KNLIGECAPF LSKLCRNFSL MQKYPVLQAS AMLALCRFMI
IDANYCDANL QLLFTVVENA PSEIVRSNCT IALGDLAVRF PNLLEPWTEN MYARLRDPSV
SVRKNAVLVL SHLILNDMMK VKGYINEMAV RVEDHDGRIS NLAKLFFHEL SKKGSNPIYN
LLPDILGKLF TQDLQKESFC NIMQFLIGSI KKDKQMESLV EKLCNRFSGV TDARQWEHIS
YCLSQLSFTE KGMKKLIELF KTYEHALSKD SVMDHFRNII NKGKKFAKPE LKVCIEEFEE
KLNKFHMEKK EQEVTARNAE IHRQKVGNIE GFPMARNDGE ESAESEIAED GEVINASIEG
ETESLHDESA SKIVESEESS GASSEVTEQE EGETEIQSLR VNRKGISQSQ DKEGHVKDLK
GVSATTRRST GSRSNKR
//
