ID A0A061F300_THECC Unreviewed; 468 AA.
AC A0A061F300;
DT 03-SEP-2014, integrated into UniProtKB/TrEMBL.
DT 03-SEP-2014, sequence version 1.
DT 24-JAN-2024, entry version 42.
DE SubName: Full=Tetratricopeptide repeat-like superfamily protein, putative isoform 1 {ECO:0000313|EMBL:EOY11660.1};
GN ORFNames=TCM_026769 {ECO:0000313|EMBL:EOY11660.1};
OS Theobroma cacao (Cacao) (Cocoa).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma.
OX NCBI_TaxID=3641 {ECO:0000313|EMBL:EOY11660.1, ECO:0000313|Proteomes:UP000026915};
RN [1] {ECO:0000313|EMBL:EOY11660.1, ECO:0000313|Proteomes:UP000026915}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Matina 1-6 {ECO:0000313|Proteomes:UP000026915};
RX PubMed=23731509; DOI=10.1186/gb-2013-14-6-r53;
RA Motamayor J.C., Mockaitis K., Schmutz J., Haiminen N., Iii D.L.,
RA Cornejo O., Findley S.D., Zheng P., Utro F., Royaert S., Saski C.,
RA Jenkins J., Podicheti R., Zhao M., Scheffler B.E., Stack J.C., Feltus F.A.,
RA Mustiga G.M., Amores F., Phillips W., Marelli J.P., May G.D., Shapiro H.,
RA Ma J., Bustamante C.D., Schnell R.J., Main D., Gilbert D., Parida L.,
RA Kuhn D.N.;
RT "The genome sequence of the most widely cultivated cacao type and its use
RT to identify candidate genes regulating pod color.";
RL Genome Biol. 14:R53.1-R53.24(2013).
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DR EMBL; CM001883; EOY11660.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A061F300; -.
DR STRING; 3641.A0A061F300; -.
DR EnsemblPlants; EOY11660; EOY11660; TCM_026769.
DR Gramene; EOY11660; EOY11660; TCM_026769.
DR eggNOG; KOG4648; Eukaryota.
DR InParanoid; A0A061F300; -.
DR OMA; THVLYAN; -.
DR Proteomes; UP000026915; Chromosome 5.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 1.
DR InterPro; IPR025986; RPAP3-like_C.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR InterPro; IPR001440; TPR_1.
DR InterPro; IPR019734; TPR_repeat.
DR PANTHER; PTHR47329; OS05G0129900 PROTEIN; 1.
DR PANTHER; PTHR47329:SF1; OS05G0129900 PROTEIN; 1.
DR Pfam; PF13877; RPAP3_C; 1.
DR Pfam; PF00515; TPR_1; 2.
DR SMART; SM00028; TPR; 3.
DR SUPFAM; SSF48452; TPR-like; 1.
DR PROSITE; PS50005; TPR; 2.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000026915};
KW TPR repeat {ECO:0000256|ARBA:ARBA00022803, ECO:0000256|PROSITE-
KW ProRule:PRU00339}.
FT REPEAT 93..126
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT REPEAT 160..193
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT DOMAIN 344..433
FT /note="RNA-polymerase II-associated protein 3-like C-
FT terminal"
FT /evidence="ECO:0000259|Pfam:PF13877"
FT REGION 34..61
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 230..253
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 265..295
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 34..48
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 238..253
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 280..294
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 468 AA; 52609 MW; A8F71C5E05FF2469 CRC64;
MASKHSRDQA LDFQGFLNNL QDWELSLKEK DKIMKSQASD KEQLTNEKGR PTGKSSLIDS
STTSSRQYDY LQNYDKFNSL SSSFVTEENM PDAASEKELG NEYFKQKKFK EAIDCYSRSI
GLSPTAVAHA NRAMAYLKIK KFQEAEDDCT EALNLDDRYI KAYSRRATAR KELGKLKESI
EDTEFALRLE PNNQEIKKQH AEFKSLYEKE ILQKASGVLR KSMQEAQEVG KSETKENGLG
MHSASNSTQR TGVATVQGYQ TKVSEYDKQK KPEKGSVTSE GIGDRNTLAG SRKDGTQLDS
GIVGLESIKK NNRTRKPELK ASVQELASLA ATRAMAEAAK NISPPNTAYQ FEVSWRALSG
DRALQAHLLK VTSPSALPQI FKNALSASML VDIIKCVATF FREEVDLAIK YLENLTKVPR
FDMLIMCLSS TEKADLLKVW DDVFCNEATP IEWAEILDNL RSVYCLKR
//
