ID A0A061F307_THECC Unreviewed; 396 AA.
AC A0A061F307;
DT 03-SEP-2014, integrated into UniProtKB/TrEMBL.
DT 03-SEP-2014, sequence version 1.
DT 27-MAR-2024, entry version 37.
DE SubName: Full=Tetratricopeptide repeat (TPR)-like superfamily protein, putative {ECO:0000313|EMBL:EOY11278.1};
GN ORFNames=TCM_046812 {ECO:0000313|EMBL:EOY11278.1};
OS Theobroma cacao (Cacao) (Cocoa).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma.
OX NCBI_TaxID=3641 {ECO:0000313|EMBL:EOY11278.1, ECO:0000313|Proteomes:UP000026915};
RN [1] {ECO:0000313|EMBL:EOY11278.1, ECO:0000313|Proteomes:UP000026915}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Matina 1-6 {ECO:0000313|Proteomes:UP000026915};
RX PubMed=23731509; DOI=10.1186/gb-2013-14-6-r53;
RA Motamayor J.C., Mockaitis K., Schmutz J., Haiminen N., Iii D.L.,
RA Cornejo O., Findley S.D., Zheng P., Utro F., Royaert S., Saski C.,
RA Jenkins J., Podicheti R., Zhao M., Scheffler B.E., Stack J.C., Feltus F.A.,
RA Mustiga G.M., Amores F., Phillips W., Marelli J.P., May G.D., Shapiro H.,
RA Ma J., Bustamante C.D., Schnell R.J., Main D., Gilbert D., Parida L.,
RA Kuhn D.N.;
RT "The genome sequence of the most widely cultivated cacao type and its use
RT to identify candidate genes regulating pod color.";
RL Genome Biol. 14:R53.1-R53.24(2013).
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily.
CC {ECO:0000256|ARBA:ARBA00007626}.
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DR EMBL; CM001883; EOY11278.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A061F307; -.
DR EnsemblPlants; EOY11278; EOY11278; TCM_046812.
DR Gramene; EOY11278; EOY11278; TCM_046812.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_49_0_1; -.
DR InParanoid; A0A061F307; -.
DR OMA; YETIMNG; -.
DR Proteomes; UP000026915; Chromosome 5.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 4.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 10.
DR PANTHER; PTHR47941; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 3, MITOCHONDRIAL; 1.
DR PANTHER; PTHR47941:SF54; PPR_LONG DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF12854; PPR_1; 1.
DR Pfam; PF13041; PPR_2; 5.
DR SUPFAM; SSF81901; HCP-like; 1.
DR PROSITE; PS51375; PPR; 10.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000026915};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 9..43
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 44..78
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 79..113
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 114..148
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 149..183
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 184..218
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 219..253
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 254..288
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 289..323
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 324..358
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ SEQUENCE 396 AA; 44203 MW; 63B954F9660C91C7 CRC64;
MEQNNCLIDI VIYNTIIDSL CKDKLVPEAL NLFSEMTGKG ILPNVVTYSS LIHAMCNSGQ
WKEVTRLLTE MVANNCKLDV VSYNILVDAF CKEGRVSEAC DIVEGMIQQI VDPNTITYNT
LMDGYCLQGK MDEARKVFNL MITKGCVPDV YGYNILINGC CKDQKIDEAM ALFHEMSRNG
LVPDTVTYNA LINGMCQLGR LSAARQLFEE MSACGLVPDA ITYSTLLHGL CKHGHVDEAL
DSFHIIQNSG IEPYIVHYNI LIDGLFQVGQ LNFARKLFCA LPVKGLRPDV YTCNIMIKGL
CKEGLLKEAY ELFRKMELNG CLQNSCSYNA IIKGFFQNNN VSRAMQILHE MVDKGFSADS
STATMLLDLL CRDGGDQSIF ELLCRNCADD QNVNMK
//
