ID A0A061F5N6_THECC Unreviewed; 441 AA.
AC A0A061F5N6;
DT 03-SEP-2014, integrated into UniProtKB/TrEMBL.
DT 03-SEP-2014, sequence version 1.
DT 28-JUN-2023, entry version 35.
DE SubName: Full=26S proteasome regulatory subunit (RPN5), putative isoform 3 {ECO:0000313|EMBL:EOY09839.1};
GN ORFNames=TCM_025213 {ECO:0000313|EMBL:EOY09839.1};
OS Theobroma cacao (Cacao) (Cocoa).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma.
OX NCBI_TaxID=3641 {ECO:0000313|EMBL:EOY09839.1, ECO:0000313|Proteomes:UP000026915};
RN [1] {ECO:0000313|EMBL:EOY09839.1, ECO:0000313|Proteomes:UP000026915}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Matina 1-6 {ECO:0000313|Proteomes:UP000026915};
RX PubMed=23731509; DOI=10.1186/gb-2013-14-6-r53;
RA Motamayor J.C., Mockaitis K., Schmutz J., Haiminen N., Iii D.L.,
RA Cornejo O., Findley S.D., Zheng P., Utro F., Royaert S., Saski C.,
RA Jenkins J., Podicheti R., Zhao M., Scheffler B.E., Stack J.C., Feltus F.A.,
RA Mustiga G.M., Amores F., Phillips W., Marelli J.P., May G.D., Shapiro H.,
RA Ma J., Bustamante C.D., Schnell R.J., Main D., Gilbert D., Parida L.,
RA Kuhn D.N.;
RT "The genome sequence of the most widely cultivated cacao type and its use
RT to identify candidate genes regulating pod color.";
RL Genome Biol. 14:R53.1-R53.24(2013).
CC -!- SIMILARITY: Belongs to the proteasome subunit p55 family.
CC {ECO:0000256|ARBA:ARBA00006397}.
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DR EMBL; CM001883; EOY09839.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A061F5N6; -.
DR EnsemblPlants; EOY09839; EOY09839; TCM_025213.
DR Gramene; EOY09839; EOY09839; TCM_025213.
DR Proteomes; UP000026915; Chromosome 5.
DR GO; GO:0000502; C:proteasome complex; IEA:UniProtKB-KW.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR000717; PCI_dom.
DR InterPro; IPR040134; PSMD12/CSN4.
DR InterPro; IPR040896; RPN5_C.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR10855:SF1; 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 12; 1.
DR PANTHER; PTHR10855; 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 12/COP9 SIGNALOSOME COMPLEX SUBUNIT 4; 1.
DR Pfam; PF01399; PCI; 1.
DR Pfam; PF18098; RPN5_C; 1.
DR SMART; SM00088; PINT; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS50250; PCI; 1.
PE 3: Inferred from homology;
KW Proteasome {ECO:0000256|ARBA:ARBA00022942, ECO:0000313|EMBL:EOY09839.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000026915}.
FT DOMAIN 230..404
FT /note="PCI"
FT /evidence="ECO:0000259|PROSITE:PS50250"
SQ SEQUENCE 441 AA; 50921 MW; 19DEBC8BC9392744 CRC64;
MDGNKGNLEA AIEQLLNVEK QMRFAGDVAE TKKAVTDILQ LCFEAKDWKS LNEQIVNLSK
KRGQLKQAVT AMVQQAMQYI DETPDLETRI ELIKTLNSVS AGKIYVEIER ARLIKKLAKI
KEEQCLIAEA ADLMQEVAVE TFGAMAKTEK IAFILEQVRL CLDRQDYVRA QILSRKISPR
VFDADTSKEK KKPKEGDNVV EEPPADIPSL LELKRIYYEL MIRYYFHNND YLEICRCYKA
IYEIPSIREN PSQWIPVLRK ICWYLILAPH DPMQSSLLNS TLEDKNLSEI PKFKLLLKQL
VTMEVIQWTS LWDSYRDEFE NEKNMLGGSL ADKAAEDLRQ RIIEHNILVV SKYYSRITLK
RLAELLCLTV QEAEKHLSEM VVSKALVAKI DRPMGIVCFQ VAKDSNEILN SWSVNLEKLL
DLVEKSCHQI HKEFGQVELC F
//
