ID A0A061F6C4_THECC Unreviewed; 808 AA.
AC A0A061F6C4;
DT 03-SEP-2014, integrated into UniProtKB/TrEMBL.
DT 03-SEP-2014, sequence version 1.
DT 27-MAR-2024, entry version 42.
DE SubName: Full=Tetratricopeptide repeat-like superfamily protein, putative isoform 1 {ECO:0000313|EMBL:EOY12920.1};
GN ORFNames=TCM_031422 {ECO:0000313|EMBL:EOY12920.1};
OS Theobroma cacao (Cacao) (Cocoa).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma.
OX NCBI_TaxID=3641 {ECO:0000313|EMBL:EOY12920.1, ECO:0000313|Proteomes:UP000026915};
RN [1] {ECO:0000313|EMBL:EOY12920.1, ECO:0000313|Proteomes:UP000026915}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Matina 1-6 {ECO:0000313|Proteomes:UP000026915};
RX PubMed=23731509; DOI=10.1186/gb-2013-14-6-r53;
RA Motamayor J.C., Mockaitis K., Schmutz J., Haiminen N., Iii D.L.,
RA Cornejo O., Findley S.D., Zheng P., Utro F., Royaert S., Saski C.,
RA Jenkins J., Podicheti R., Zhao M., Scheffler B.E., Stack J.C., Feltus F.A.,
RA Mustiga G.M., Amores F., Phillips W., Marelli J.P., May G.D., Shapiro H.,
RA Ma J., Bustamante C.D., Schnell R.J., Main D., Gilbert D., Parida L.,
RA Kuhn D.N.;
RT "The genome sequence of the most widely cultivated cacao type and its use
RT to identify candidate genes regulating pod color.";
RL Genome Biol. 14:R53.1-R53.24(2013).
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DR EMBL; CM001885; EOY12919.1; -; Genomic_DNA.
DR EMBL; CM001885; EOY12920.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A061F6C4; -.
DR EnsemblPlants; EOY12919; EOY12919; TCM_031422.
DR EnsemblPlants; EOY12920; EOY12920; TCM_031422.
DR Gramene; EOY12919; EOY12919; TCM_031422.
DR Gramene; EOY12920; EOY12920; TCM_031422.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_49_2_1; -.
DR InParanoid; A0A061F6C4; -.
DR OMA; CKRGLME; -.
DR Proteomes; UP000026915; Chromosome 7.
DR GO; GO:0003729; F:mRNA binding; IBA:GO_Central.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 8.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 14.
DR PANTHER; PTHR47932; ATPASE EXPRESSION PROTEIN 3; 1.
DR PANTHER; PTHR47932:SF7; PPR_LONG DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF01535; PPR; 4.
DR Pfam; PF12854; PPR_1; 2.
DR Pfam; PF13041; PPR_2; 6.
DR SUPFAM; SSF81901; HCP-like; 2.
DR PROSITE; PS51375; PPR; 17.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000026915};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 131..165
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 201..235
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 271..305
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 306..340
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 341..375
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 376..410
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 411..445
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 446..480
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 481..515
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 516..550
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 551..585
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 586..620
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 621..655
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 656..690
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 691..725
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 726..760
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 761..795
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ SEQUENCE 808 AA; 90750 MW; DE8EAD7EF7C9C72E CRC64;
MLFSKLLKKP FSSCSTKALI DQISPAFLHQ KHSVDLNPTL LSKLQPSHVK PILLTLQSKP
SSALNFFRWT QRFLKLPHAV PSYCALISLL LRHRVFGAAA EVFDEMMVLF GTNIDVFEAF
NEGIKDFDSN PNVVFGFLLE SYCKKGMVDM SFCVFVKMSR CGVYVSPNLV YRMLYSLVNA
NRIDILVDNY GELCRLFRTQ DFCVYGIVME GFLKKGKVDK ALNFHKGVIE RGLGVDIVAC
NKILNSLSVN KEIGIASKLF DMILSLGPSP NVVTFSTLIN MYCKDGKLDK AFELYNAMIE
RNILPDLIMY AILIDGFFKA GRLDEGEKLL SVALDRGIKL DVVVFSLIMD AFGKVGDLGR
VVQVYKRMLE EGLSPNVVSY SILINGLYGN GRMLEACGVF GQIIKRGFEP SIVTYSSLID
GFCKLGNLRD GFYLFDDMVK NGHQPDVVVY SALINGLCKE GMMTSALMLF FNCVSRGLKP
NIFTFNSLMD GYCRLKQLRN AVKVSTVMGM YNIKQDMVTH TVLIREISKQ GKLDVALLIF
FQMLKRGFPG DAITYCTIIA GYCKHKNLTS GLQIFKLMQR NGVVPDIAIY NVLLNMFFKE
CLLEKASGLF RKLVEKGPKP DIITYNTMIC GYCSLKRLDV AISLFKQLNG ALFGPNSITF
TILIDAFCKE GRMDDAMLMF SKMLEKGPEP NVVTYSCLID GYFKSQDMRS ATDLHEEMLE
NKICPNIVSY SILIDGFCKR GLMAEASLAF HCALDIHLLP DVVAFTILIR GYCKVGRLLE
AMLLCEQMFM NGIMPDDLLE QTLVEYNL
//
