ID A0A061F9L2_THECC Unreviewed; 305 AA.
AC A0A061F9L2;
DT 03-SEP-2014, integrated into UniProtKB/TrEMBL.
DT 03-SEP-2014, sequence version 1.
DT 27-MAR-2024, entry version 43.
DE SubName: Full=CTC-interacting domain 9 {ECO:0000313|EMBL:EOY13696.1};
GN ORFNames=TCM_032334 {ECO:0000313|EMBL:EOY13696.1};
OS Theobroma cacao (Cacao) (Cocoa).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma.
OX NCBI_TaxID=3641 {ECO:0000313|EMBL:EOY13696.1, ECO:0000313|Proteomes:UP000026915};
RN [1] {ECO:0000313|EMBL:EOY13696.1, ECO:0000313|Proteomes:UP000026915}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Matina 1-6 {ECO:0000313|Proteomes:UP000026915};
RX PubMed=23731509; DOI=10.1186/gb-2013-14-6-r53;
RA Motamayor J.C., Mockaitis K., Schmutz J., Haiminen N., Iii D.L.,
RA Cornejo O., Findley S.D., Zheng P., Utro F., Royaert S., Saski C.,
RA Jenkins J., Podicheti R., Zhao M., Scheffler B.E., Stack J.C., Feltus F.A.,
RA Mustiga G.M., Amores F., Phillips W., Marelli J.P., May G.D., Shapiro H.,
RA Ma J., Bustamante C.D., Schnell R.J., Main D., Gilbert D., Parida L.,
RA Kuhn D.N.;
RT "The genome sequence of the most widely cultivated cacao type and its use
RT to identify candidate genes regulating pod color.";
RL Genome Biol. 14:R53.1-R53.24(2013).
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DR EMBL; CM001885; EOY13696.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A061F9L2; -.
DR STRING; 3641.A0A061F9L2; -.
DR EnsemblPlants; EOY13696; EOY13696; TCM_032334.
DR Gramene; EOY13696; EOY13696; TCM_032334.
DR eggNOG; KOG0118; Eukaryota.
DR HOGENOM; CLU_042473_0_0_1; -.
DR InParanoid; A0A061F9L2; -.
DR OMA; KSEFKMQ; -.
DR Proteomes; UP000026915; Chromosome 7.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR CDD; cd12459; RRM1_CID8_like; 1.
DR CDD; cd12460; RRM2_CID8_like; 1.
DR Gene3D; 3.30.70.330; -; 2.
DR InterPro; IPR009818; Ataxin-2_C.
DR InterPro; IPR034823; CID8-like_RRM1.
DR InterPro; IPR034825; CID8-like_RRM2.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR000504; RRM_dom.
DR PANTHER; PTHR32343:SF22; POLYADENYLATE-BINDING PROTEIN-INTERACTING PROTEIN 9; 1.
DR PANTHER; PTHR32343; SERINE/ARGININE-RICH SPLICING FACTOR; 1.
DR Pfam; PF07145; PAM2; 1.
DR Pfam; PF00076; RRM_1; 2.
DR SMART; SM00360; RRM; 2.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 2.
DR PROSITE; PS50102; RRM; 2.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000026915};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884, ECO:0000256|PROSITE-
KW ProRule:PRU00176}.
FT DOMAIN 120..195
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT DOMAIN 217..293
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT REGION 81..104
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 81..95
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 305 AA; 33985 MW; 3827F7F7D7C5571A CRC64;
MAAVADKSGE AAAAAAAANN NNNLVVEKAK SESKEFNVQK LVDMFTKLNP LAKEFFPSSY
HHNQTNNNNT NNNFNQVPIN KQSVGNENFS NRRRRNNYNQ GRRRLNGRAF RAQREDSIRR
TVYVSDIDQT ITEERLAGLF SNCGQVVDCR VCGDPHSVLR FAFVEFADEE GARAALNLGG
TMLGFYPVKV LPSKTAILPV NPTFLPRSED EREMCTRTVY CTNIDKKVSQ AEVKNFFESA
CGEVTRLRLL GDHVHSTRIA FVEFAMAESA IIALNCSGMV LGTQPIRVSP SKTPVRPRVT
RPTLH
//
