GenomeNet

Database: UniProt
Entry: A0A061F9Q1_THECC
LinkDB: A0A061F9Q1_THECC
Original site: A0A061F9Q1_THECC 
ID   A0A061F9Q1_THECC        Unreviewed;       132 AA.
AC   A0A061F9Q1;
DT   03-SEP-2014, integrated into UniProtKB/TrEMBL.
DT   03-SEP-2014, sequence version 1.
DT   28-JUN-2023, entry version 27.
DE   RecName: Full=Retrotransposon Copia-like N-terminal domain-containing protein {ECO:0000259|Pfam:PF14244};
GN   ORFNames=TCM_032027 {ECO:0000313|EMBL:EOY13452.1};
OS   Theobroma cacao (Cacao) (Cocoa).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma.
OX   NCBI_TaxID=3641 {ECO:0000313|EMBL:EOY13452.1, ECO:0000313|Proteomes:UP000026915};
RN   [1] {ECO:0000313|EMBL:EOY13452.1, ECO:0000313|Proteomes:UP000026915}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Matina 1-6 {ECO:0000313|Proteomes:UP000026915};
RX   PubMed=23731509; DOI=10.1186/gb-2013-14-6-r53;
RA   Motamayor J.C., Mockaitis K., Schmutz J., Haiminen N., Iii D.L.,
RA   Cornejo O., Findley S.D., Zheng P., Utro F., Royaert S., Saski C.,
RA   Jenkins J., Podicheti R., Zhao M., Scheffler B.E., Stack J.C., Feltus F.A.,
RA   Mustiga G.M., Amores F., Phillips W., Marelli J.P., May G.D., Shapiro H.,
RA   Ma J., Bustamante C.D., Schnell R.J., Main D., Gilbert D., Parida L.,
RA   Kuhn D.N.;
RT   "The genome sequence of the most widely cultivated cacao type and its use
RT   to identify candidate genes regulating pod color.";
RL   Genome Biol. 14:R53.1-R53.24(2013).
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; CM001885; EOY13452.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A061F9Q1; -.
DR   EnsemblPlants; EOY13452; EOY13452; TCM_032027.
DR   Gramene; EOY13452; EOY13452; TCM_032027.
DR   eggNOG; KOG0017; Eukaryota.
DR   HOGENOM; CLU_071438_1_1_1; -.
DR   InParanoid; A0A061F9Q1; -.
DR   OMA; DAMDSTH; -.
DR   Proteomes; UP000026915; Chromosome 7.
DR   InterPro; IPR029472; Copia-like_N.
DR   PANTHER; PTHR37610; CCHC-TYPE DOMAIN-CONTAINING PROTEIN; 1.
DR   PANTHER; PTHR37610:SF6; RETROTRAN_GAG_3 DOMAIN-CONTAINING PROTEIN; 1.
DR   Pfam; PF14244; Retrotran_gag_3; 1.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000026915}.
FT   DOMAIN          35..80
FT                   /note="Retrotransposon Copia-like N-terminal"
FT                   /evidence="ECO:0000259|Pfam:PF14244"
SQ   SEQUENCE   132 AA;  15098 MW;  17AA2D5A14457145 CRC64;
     MSKSTNLRPQ MSQTSIDSRS PISLIADPQS PYFLHHTDHP RSVVINPKLT TNNYVVWSRS
     FLLVLSIRNK IGFMNGTIPK LDATKPIFPS WTRCNNLLVA WLLDSITQPI ASIVFYVEST
     MEIWNTFKQN FA
//
DBGET integrated database retrieval system