ID   A0A061F9V4_THECC        Unreviewed;       739 AA.
AC   A0A061F9V4;
DT   03-SEP-2014, integrated into UniProtKB/TrEMBL.
DT   03-SEP-2014, sequence version 1.
DT   27-MAR-2024, entry version 39.
DE   SubName: Full=Tetratricopeptide repeat (TPR)-like superfamily protein, putative {ECO:0000313|EMBL:EOY13811.1};
GN   ORFNames=TCM_032464 {ECO:0000313|EMBL:EOY13811.1};
OS   Theobroma cacao (Cacao) (Cocoa).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma.
OX   NCBI_TaxID=3641 {ECO:0000313|EMBL:EOY13811.1, ECO:0000313|Proteomes:UP000026915};
RN   [1] {ECO:0000313|EMBL:EOY13811.1, ECO:0000313|Proteomes:UP000026915}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Matina 1-6 {ECO:0000313|Proteomes:UP000026915};
RX   PubMed=23731509; DOI=10.1186/gb-2013-14-6-r53;
RA   Motamayor J.C., Mockaitis K., Schmutz J., Haiminen N., Iii D.L.,
RA   Cornejo O., Findley S.D., Zheng P., Utro F., Royaert S., Saski C.,
RA   Jenkins J., Podicheti R., Zhao M., Scheffler B.E., Stack J.C., Feltus F.A.,
RA   Mustiga G.M., Amores F., Phillips W., Marelli J.P., May G.D., Shapiro H.,
RA   Ma J., Bustamante C.D., Schnell R.J., Main D., Gilbert D., Parida L.,
RA   Kuhn D.N.;
RT   "The genome sequence of the most widely cultivated cacao type and its use
RT   to identify candidate genes regulating pod color.";
RL   Genome Biol. 14:R53.1-R53.24(2013).
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DR   EMBL; CM001885; EOY13811.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A061F9V4; -.
DR   EnsemblPlants; EOY13811; EOY13811; TCM_032464.
DR   Gramene; EOY13811; EOY13811; TCM_032464.
DR   eggNOG; KOG4197; Eukaryota.
DR   HOGENOM; CLU_002706_0_5_1; -.
DR   InParanoid; A0A061F9V4; -.
DR   OMA; NLQHGQE; -.
DR   Proteomes; UP000026915; Chromosome 7.
DR   GO; GO:0043231; C:intracellular membrane-bounded organelle; IBA:GO_Central.
DR   GO; GO:0003723; F:RNA binding; IBA:GO_Central.
DR   GO; GO:0009451; P:RNA modification; IBA:GO_Central.
DR   Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 3.
DR   InterPro; IPR046848; E_motif.
DR   InterPro; IPR002885; Pentatricopeptide_rpt.
DR   InterPro; IPR045215; PPR_prot_At1g15510.
DR   InterPro; IPR011990; TPR-like_helical_dom_sf.
DR   NCBIfam; TIGR00756; PPR; 7.
DR   PANTHER; PTHR24015; OS07G0578800 PROTEIN-RELATED; 1.
DR   PANTHER; PTHR24015:SF1969; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN; 1.
DR   Pfam; PF20431; E_motif; 1.
DR   Pfam; PF01535; PPR; 3.
DR   Pfam; PF13041; PPR_2; 4.
DR   SUPFAM; SSF48452; TPR-like; 1.
DR   PROSITE; PS51375; PPR; 7.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000026915};
KW   Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT   REPEAT          167..201
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          237..267
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          268..302
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          303..337
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          404..438
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          475..505
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          506..540
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ   SEQUENCE   739 AA;  82960 MW;  6207F510BF2B3332 CRC64;
     MPSPSSRLVL QGLSISEIQK FIPKRWKQCV KPVDIQSNQP SASYNNQKQE LKTLTTEDES
     MLENLLTSLK EFVTQGHLLK AFKSFSLIQQ HVSPTASYDV ILHPISSLLL SCTNLKRLPP
     GKQLHAQIIS LGLEQHPVLV PKLFTFYSTF NLLDDAQVVT ENCNFLHPLP WNLLISSFVK
     NDLFEEALSA YCKMVNKGIR PDNFTYPSVL KACGEKLDVD FGRMVHHSIS GSRHDWNLYV
     HNALITMYGK FGQVDVARDL FNKMPERDDI SWNAMINCYA SKGMWGEAFK LFDCMRAEDI
     ELNFITWNTI TGGCLRTGNF QGSLELLSQM RSSGIHLDPV AMIIGLGACS HIGALKLGKE
     IHGSAIRSCC DTFGNVGNAM ITMYSRCKDL RHASIVFQSI EEKSIITWNS MLSGYTHLGQ
     SEEASFLFRE MLLSGLEPNY VTIASILPLC ARVANLQHGK EFHCYITRRK VFEDCLLLWN
     ALIDMYARSG KVLAAKRVFD LMRKRDEVTY TSLIAGYGMQ GEGQAAIKLF KEMINLQIKP
     DHVTMVAVLS ACSHCGLVIE GQIWFEKMQS FYGIIPRLEH FSCMVDLYGR AGLLNKAKEI
     ITRMPYKPSA SMWATLLGAC RIHGNTDIGE WAAEKLLQLR PQNSGYYVLI ANMYAAAGCW
     SKLAKVRSFM RDLGVKKSPG CAWVDVGSVF SPFVVGNTSN PYAQEIYQVL DGMTELMKDA
     GYVGWDKFGL DGEVLEEIE
//