ID A0A061F9Y8_THECC Unreviewed; 477 AA.
AC A0A061F9Y8;
DT 03-SEP-2014, integrated into UniProtKB/TrEMBL.
DT 03-SEP-2014, sequence version 1.
DT 27-MAR-2024, entry version 33.
DE SubName: Full=PLAT/LH2 domain-containing lipoxygenase family protein, putative {ECO:0000313|EMBL:EOY11314.1};
GN ORFNames=TCM_026539 {ECO:0000313|EMBL:EOY11314.1};
OS Theobroma cacao (Cacao) (Cocoa).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma.
OX NCBI_TaxID=3641 {ECO:0000313|EMBL:EOY11314.1, ECO:0000313|Proteomes:UP000026915};
RN [1] {ECO:0000313|EMBL:EOY11314.1, ECO:0000313|Proteomes:UP000026915}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Matina 1-6 {ECO:0000313|Proteomes:UP000026915};
RX PubMed=23731509; DOI=10.1186/gb-2013-14-6-r53;
RA Motamayor J.C., Mockaitis K., Schmutz J., Haiminen N., Iii D.L.,
RA Cornejo O., Findley S.D., Zheng P., Utro F., Royaert S., Saski C.,
RA Jenkins J., Podicheti R., Zhao M., Scheffler B.E., Stack J.C., Feltus F.A.,
RA Mustiga G.M., Amores F., Phillips W., Marelli J.P., May G.D., Shapiro H.,
RA Ma J., Bustamante C.D., Schnell R.J., Main D., Gilbert D., Parida L.,
RA Kuhn D.N.;
RT "The genome sequence of the most widely cultivated cacao type and its use
RT to identify candidate genes regulating pod color.";
RL Genome Biol. 14:R53.1-R53.24(2013).
CC -!- COFACTOR:
CC Name=Fe cation; Xref=ChEBI:CHEBI:24875;
CC Evidence={ECO:0000256|ARBA:ARBA00001962,
CC ECO:0000256|RuleBase:RU003974};
CC -!- SIMILARITY: Belongs to the lipoxygenase family.
CC {ECO:0000256|RuleBase:RU003974}.
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DR EMBL; CM001883; EOY11314.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A061F9Y8; -.
DR STRING; 3641.A0A061F9Y8; -.
DR EnsemblPlants; EOY11314; EOY11314; TCM_026539.
DR Gramene; EOY11314; EOY11314; TCM_026539.
DR eggNOG; KOG0968; Eukaryota.
DR HOGENOM; CLU_572950_0_0_1; -.
DR InParanoid; A0A061F9Y8; -.
DR Proteomes; UP000026915; Chromosome 5.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0016702; F:oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen; IBA:GO_Central.
DR GO; GO:0004523; F:RNA-DNA hybrid ribonuclease activity; IEA:InterPro.
DR GO; GO:0034440; P:lipid oxidation; IBA:GO_Central.
DR CDD; cd06222; RNase_H_like; 1.
DR Gene3D; 3.10.450.60; -; 1.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR InterPro; IPR000907; LipOase.
DR InterPro; IPR013819; LipOase_C.
DR InterPro; IPR036226; LipOase_C_sf.
DR InterPro; IPR020833; LipOase_Fe_BS.
DR InterPro; IPR044730; RNase_H-like_dom_plant.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR002156; RNaseH_domain.
DR InterPro; IPR036397; RNaseH_sf.
DR PANTHER; PTHR11771; LIPOXYGENASE; 1.
DR PANTHER; PTHR11771:SF205; LIPOXYGENASE; 1.
DR Pfam; PF00305; Lipoxygenase; 2.
DR PRINTS; PR00087; LIPOXYGENASE.
DR SUPFAM; SSF48484; Lipoxigenase; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR PROSITE; PS00711; LIPOXYGENASE_1; 1.
DR PROSITE; PS51393; LIPOXYGENASE_3; 1.
DR PROSITE; PS50879; RNASE_H_1; 1.
PE 3: Inferred from homology;
KW Dioxygenase {ECO:0000256|ARBA:ARBA00022964, ECO:0000256|RuleBase:RU003974};
KW Iron {ECO:0000256|ARBA:ARBA00023004, ECO:0000256|RuleBase:RU003974};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723,
KW ECO:0000256|RuleBase:RU003974};
KW Oxidoreductase {ECO:0000256|ARBA:ARBA00023002,
KW ECO:0000256|RuleBase:RU003974};
KW Reference proteome {ECO:0000313|Proteomes:UP000026915}.
FT DOMAIN 1..310
FT /note="Lipoxygenase"
FT /evidence="ECO:0000259|PROSITE:PS51393"
FT DOMAIN 400..477
FT /note="RNase H type-1"
FT /evidence="ECO:0000259|PROSITE:PS50879"
SQ SEQUENCE 477 AA; 54052 MW; 7055441D9ED281D0 CRC64;
MSNSQPDSNV FSVRIVSIDH YMALPISGYD TCYSSFQGDK FGVVSKVYTP MEHGVEGSIW
QFAKAFVAIN DCAHHQLISH WLNTHAVLEP FVIATNKQLS VVHLICKLLH PHFRDTMTIN
ALARELLVNA GGVIKITFCS GKYSMEMSSE IYKSWNFFDQ ALPSDLKKRG IAVDDTNSLH
GLRLLIKDYP YAVDGLKIWF AIEKWVRDYC SFYYKTDGMV QQDPELIESC TIIIWIASAP
HAAVNFGQFA YAGYSLNRPT LSRRLMPEKG TPEYAELEKN PDKVFFRTIT SQLQTFIGMS
VVEVLSKHAS RRINKQSFVW KSIIKPMTEA DVCSFVLRGG KNWGDDQCWD LVRVKVAWWA
KAKWLVDFQQ LEQTIRCLEV NRLHTRIRGG RQTVEWEPLN RGFLKFNVDG AAKGNPCQAA
IRGVLREEEG VVKILFSIPI GISKANTAEV MAIKEAFKLF GVSKWVGSHC LIVESDS
//
