ID   A0A061FAU4_THECC        Unreviewed;       632 AA.
AC   A0A061FAU4;
DT   03-SEP-2014, integrated into UniProtKB/TrEMBL.
DT   03-SEP-2014, sequence version 1.
DT   27-MAR-2024, entry version 44.
DE   SubName: Full=ATP binding,nucleic acid binding,helicases, putative {ECO:0000313|EMBL:EOY11599.1};
GN   ORFNames=TCM_026734 {ECO:0000313|EMBL:EOY11599.1};
OS   Theobroma cacao (Cacao) (Cocoa).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma.
OX   NCBI_TaxID=3641 {ECO:0000313|EMBL:EOY11599.1, ECO:0000313|Proteomes:UP000026915};
RN   [1] {ECO:0000313|EMBL:EOY11599.1, ECO:0000313|Proteomes:UP000026915}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Matina 1-6 {ECO:0000313|Proteomes:UP000026915};
RX   PubMed=23731509; DOI=10.1186/gb-2013-14-6-r53;
RA   Motamayor J.C., Mockaitis K., Schmutz J., Haiminen N., Iii D.L.,
RA   Cornejo O., Findley S.D., Zheng P., Utro F., Royaert S., Saski C.,
RA   Jenkins J., Podicheti R., Zhao M., Scheffler B.E., Stack J.C., Feltus F.A.,
RA   Mustiga G.M., Amores F., Phillips W., Marelli J.P., May G.D., Shapiro H.,
RA   Ma J., Bustamante C.D., Schnell R.J., Main D., Gilbert D., Parida L.,
RA   Kuhn D.N.;
RT   "The genome sequence of the most widely cultivated cacao type and its use
RT   to identify candidate genes regulating pod color.";
RL   Genome Biol. 14:R53.1-R53.24(2013).
CC   -!- SIMILARITY: Belongs to the PPR family. P subfamily.
CC       {ECO:0000256|ARBA:ARBA00007626}.
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DR   EMBL; CM001883; EOY11599.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A061FAU4; -.
DR   EnsemblPlants; EOY11599; EOY11599; TCM_026734.
DR   Gramene; EOY11599; EOY11599; TCM_026734.
DR   eggNOG; KOG4197; Eukaryota.
DR   HOGENOM; CLU_002706_49_0_1; -.
DR   InParanoid; A0A061FAU4; -.
DR   OMA; CELLRTM; -.
DR   Proteomes; UP000026915; Chromosome 5.
DR   Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 7.
DR   InterPro; IPR002885; Pentatricopeptide_rpt.
DR   InterPro; IPR011990; TPR-like_helical_dom_sf.
DR   NCBIfam; TIGR00756; PPR; 13.
DR   PANTHER; PTHR47447; OS03G0856100 PROTEIN; 1.
DR   PANTHER; PTHR47447:SF23; PENTACOTRIPEPTIDE-REPEAT REGION OF PRORP DOMAIN-CONTAINING PROTEIN; 1.
DR   Pfam; PF12854; PPR_1; 2.
DR   Pfam; PF13041; PPR_2; 5.
DR   SUPFAM; SSF81901; HCP-like; 1.
DR   SUPFAM; SSF48452; TPR-like; 1.
DR   PROSITE; PS51375; PPR; 13.
PE   3: Inferred from homology;
KW   Reference proteome {ECO:0000313|Proteomes:UP000026915};
KW   Repeat {ECO:0000256|ARBA:ARBA00022737}; Signal {ECO:0000256|SAM:SignalP}.
FT   SIGNAL          1..24
FT                   /evidence="ECO:0000256|SAM:SignalP"
FT   CHAIN           25..632
FT                   /evidence="ECO:0000256|SAM:SignalP"
FT                   /id="PRO_5001598215"
FT   REPEAT          140..174
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          175..209
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          210..244
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          245..279
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          280..314
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          315..349
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          350..384
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          385..419
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          420..454
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          455..489
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          490..524
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          525..559
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          560..594
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ   SEQUENCE   632 AA;  71173 MW;  245298A379488EAE CRC64;
     MVPLVSTPFV IWFLLLAILL EIDSKEKKTK MRAWRCTSSS SALQLRLLLL GNSFSLSPPI
     FVSSLKYPFF STSSTRFKKS KYVFHKIEDA LDLFNHMLHT YPRPSIVEFT QVLGAIVRMK
     HYETAISLLR QMDLVGIRHD VYTLSILVNC FCRLRCSDFG FSLLGKMLKL GIQPDTTTFN
     TLVNGFCFEG KIAEAVILFD EIVRNGYQPD LITYNTMING LCKVGYTSGA TKLLRNMEQS
     GCVPDIVTYN TIIDCLCKDK LVPEALNLLS EMRGKGIPQD VVTYNSFIHA MCSSGRWNEV
     MRLLTEMVAN NCKPNIVSYS ILVDAFCKEG RVSEACDTIK VMIQQDVDPN TITYTALMGG
     YCLQGKMEEA RRVLNLMITK GCVPNIYSYS IMINGYCKFQ KIDEAMELFH EMSRNGLVPN
     TVTYNTLING MCHLGRLSAA RELFKEMSTR GLVPDMMTYS ILLHGLCTHG HVDEAMELFH
     VMQSNGIEAD IVHYSIIIDG LCQVGQLNVA RKLFCALPVK GLHPNVYTCN IMIKGLCKEG
     LLNEAYDLFR KMEVNGCLQD SCSYNTMIKG FFQNNDVSRA VQILHEMVDR GFSADSSTAT
     MVVDLLCKNG GDQSILELLF RNSEDDQNVN MK
//