ID A0A061FH09_THECC Unreviewed; 1058 AA.
AC A0A061FH09;
DT 03-SEP-2014, integrated into UniProtKB/TrEMBL.
DT 03-SEP-2014, sequence version 1.
DT 27-MAR-2024, entry version 39.
DE SubName: Full=PHD finger family protein, putative isoform 5 {ECO:0000313|EMBL:EOY16158.1};
GN ORFNames=TCM_035010 {ECO:0000313|EMBL:EOY16158.1};
OS Theobroma cacao (Cacao) (Cocoa).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma.
OX NCBI_TaxID=3641 {ECO:0000313|EMBL:EOY16158.1, ECO:0000313|Proteomes:UP000026915};
RN [1] {ECO:0000313|EMBL:EOY16158.1, ECO:0000313|Proteomes:UP000026915}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Matina 1-6 {ECO:0000313|Proteomes:UP000026915};
RX PubMed=23731509; DOI=10.1186/gb-2013-14-6-r53;
RA Motamayor J.C., Mockaitis K., Schmutz J., Haiminen N., Iii D.L.,
RA Cornejo O., Findley S.D., Zheng P., Utro F., Royaert S., Saski C.,
RA Jenkins J., Podicheti R., Zhao M., Scheffler B.E., Stack J.C., Feltus F.A.,
RA Mustiga G.M., Amores F., Phillips W., Marelli J.P., May G.D., Shapiro H.,
RA Ma J., Bustamante C.D., Schnell R.J., Main D., Gilbert D., Parida L.,
RA Kuhn D.N.;
RT "The genome sequence of the most widely cultivated cacao type and its use
RT to identify candidate genes regulating pod color.";
RL Genome Biol. 14:R53.1-R53.24(2013).
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DR EMBL; CM001886; EOY16158.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A061FH09; -.
DR EnsemblPlants; EOY16158; EOY16158; TCM_035010.
DR Gramene; EOY16158; EOY16158; TCM_035010.
DR Proteomes; UP000026915; Chromosome 8.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 2.
DR InterPro; IPR034732; EPHD.
DR InterPro; IPR011011; Znf_FYVE_PHD.
DR InterPro; IPR001965; Znf_PHD.
DR InterPro; IPR019787; Znf_PHD-finger.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR13793:SF107; PHD FINGER FAMILY PROTEIN; 1.
DR PANTHER; PTHR13793; PHD FINGER PROTEINS; 1.
DR Pfam; PF13831; PHD_2; 1.
DR Pfam; PF13832; zf-HC5HC2H_2; 1.
DR SMART; SM00249; PHD; 2.
DR SUPFAM; SSF57903; FYVE/PHD zinc finger; 1.
DR PROSITE; PS51805; EPHD; 1.
DR PROSITE; PS50016; ZF_PHD_2; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000026915};
KW Signal {ECO:0000256|SAM:SignalP}; Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00146}.
FT SIGNAL 1..22
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 23..1058
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5001602061"
FT DOMAIN 307..358
FT /note="PHD-type"
FT /evidence="ECO:0000259|PROSITE:PS50016"
FT DOMAIN 365..486
FT /note="PHD-type"
FT /evidence="ECO:0000259|PROSITE:PS51805"
FT REGION 29..63
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 113..141
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 539..559
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 743..817
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 746..766
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 776..817
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1058 AA; 116883 MW; 178C2A1305F547C0 CRC64;
MRRGRWWCWW WLLLSVVTEA LCHRQKKMMG RGADGGCGTE ERPCRPISRI PGRSPVTQPK
NAEKQISSDV GVDFFSQARK ALCERSPFDV PVDGSVSASS VPTLPSGLAS LLKQTDSRKR
HKKSHSGADK KSSRQGERAR GGSIWVETEE YFRDLALLDI DALFGITSFS FLAARKKCFV
IPYVGNEPRE NLNLVADMDE KANVSSGENF HVRNENGDVH KEDGTEMVKE EDGQLMEIDR
VVTQAQFPAK EEKVCSVSDS ASGLEWLLGS RSRLLLTSER PSKKRKLLGE DAGLEKVLIA
CACDGNSSLC HFCCTGDTRK ESNRLIVCSS CKVAVHQKCY GVQNDVDSSW LCSWCKHKND
GNDTVKPCVL CPKQGGALKP IQKSDENVGS VEFAHLFCSH WMPEVYIEDL TKMEPIINVG
GIKDTRKKLV CSVCKVKYGA CVRCSHGTCR TSFHPICARE ARHRMEVWGR YGCDNIELRA
FCSKHSDIHD NSSSPQLGEL CAAGSDSSFT DQPSPTSIDN SQTLKIGLKN GDKIAVHVEA
PDDNSDKSGD GELQEIGLPD ARSNTRVASE FGDAQQLVDV GLLERSNGDD VYPSDSLNLA
LILKKLIDRG KVNVKDVALE IGLSPDSLSA TLDEDSLAPD LRCKIVKWLR NHAYMGPSQK
NLKVKIKSLI SSKGEAGAID SSDDIMVSES DITDPVAVKS VPPRRRTKSN VRILRDNKVV
CSSDEIINDN GVVMDEGRVD GLANEETNDS SKTFIPDASG KNSTKRDGSL DSSKRHLPTY
AGNSVDPLND SLSERSQLER ATTPDKNTAA NSDQANSICP TVNPIIPDLI RTEEFSNFYI
HPYIHKKLLQ MHNGMLYKNR VGEFEGRKDK LKEFGGAREG DLSRLVASSN ASVCCSHESE
NSKCNDKSCS SDDSEQLVKA RKSGALKFSP EDEVEGEIIY YQHRLLGNAV GRNSWTDNLV
SRVAKSLPQE VEAARGQRWD AVLVNQYLYD LREAKKQGRK ERRHKEAQAV LAAATAAAAA
SSRISSLRKD GLEDSSHQEV ILMDPCFYEF FYCLHVRI
//
