ID A0A061FLC7_THECC Unreviewed; 593 AA.
AC A0A061FLC7;
DT 03-SEP-2014, integrated into UniProtKB/TrEMBL.
DT 03-SEP-2014, sequence version 1.
DT 27-MAR-2024, entry version 41.
DE SubName: Full=RNI-like superfamily protein {ECO:0000313|EMBL:EOY17901.1};
GN ORFNames=TCM_042602 {ECO:0000313|EMBL:EOY17901.1};
OS Theobroma cacao (Cacao) (Cocoa).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma.
OX NCBI_TaxID=3641 {ECO:0000313|EMBL:EOY17901.1, ECO:0000313|Proteomes:UP000026915};
RN [1] {ECO:0000313|EMBL:EOY17901.1, ECO:0000313|Proteomes:UP000026915}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Matina 1-6 {ECO:0000313|Proteomes:UP000026915};
RX PubMed=23731509; DOI=10.1186/gb-2013-14-6-r53;
RA Motamayor J.C., Mockaitis K., Schmutz J., Haiminen N., Iii D.L.,
RA Cornejo O., Findley S.D., Zheng P., Utro F., Royaert S., Saski C.,
RA Jenkins J., Podicheti R., Zhao M., Scheffler B.E., Stack J.C., Feltus F.A.,
RA Mustiga G.M., Amores F., Phillips W., Marelli J.P., May G.D., Shapiro H.,
RA Ma J., Bustamante C.D., Schnell R.J., Main D., Gilbert D., Parida L.,
RA Kuhn D.N.;
RT "The genome sequence of the most widely cultivated cacao type and its use
RT to identify candidate genes regulating pod color.";
RL Genome Biol. 14:R53.1-R53.24(2013).
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DR EMBL; CM001888; EOY17901.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A061FLC7; -.
DR STRING; 3641.A0A061FLC7; -.
DR EnsemblPlants; EOY17901; EOY17901; TCM_042602.
DR Gramene; EOY17901; EOY17901; TCM_042602.
DR eggNOG; KOG1947; Eukaryota.
DR HOGENOM; CLU_022456_1_0_1; -.
DR InParanoid; A0A061FLC7; -.
DR OMA; CYTATPD; -.
DR Proteomes; UP000026915; Chromosome 10.
DR GO; GO:0019005; C:SCF ubiquitin ligase complex; IBA:GO_Central.
DR GO; GO:0048856; P:anatomical structure development; IEA:UniProt.
DR GO; GO:0070887; P:cellular response to chemical stimulus; IEA:UniProt.
DR GO; GO:0031146; P:SCF-dependent proteasomal ubiquitin-dependent protein catabolic process; IBA:GO_Central.
DR CDD; cd22159; F-box_AtTIR1-like; 1.
DR Gene3D; 1.20.1280.50; -; 1.
DR Gene3D; 3.80.10.10; Ribonuclease Inhibitor; 1.
DR InterPro; IPR041567; COI1_F-box.
DR InterPro; IPR032675; LRR_dom_sf.
DR InterPro; IPR041101; Transp_inhibit.
DR PANTHER; PTHR16134; F-BOX/TPR REPEAT PROTEIN POF3; 1.
DR PANTHER; PTHR16134:SF119; S-PHASE KINASE-ASSOCIATED PROTEIN 2, ISOFORM A; 1.
DR Pfam; PF18511; F-box_5; 1.
DR Pfam; PF18791; Transp_inhibit; 1.
DR SUPFAM; SSF52047; RNI-like; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000026915}.
FT DOMAIN 16..56
FT /note="COI1 F-box"
FT /evidence="ECO:0000259|Pfam:PF18511"
FT DOMAIN 76..121
FT /note="Transport inhibitor response 1"
FT /evidence="ECO:0000259|Pfam:PF18791"
SQ SEQUENCE 593 AA; 67194 MW; 2FCEB4A2998C6756 CRC64;
MEENDNKMNK TMTSPVGMSD VVLGCVMPYI HDPKDRDAVS LVCRRWYELD ALTRKHITIA
LCYTTSPDRL RRRFQHLESL KLKGKPRAAM FNLIPEDWGG YVTPWVNEIA ENFNCLKSLH
FRRMIVKDSD LEVLARSRGK VLQVLKLDKC SGFSTDGLLH VGRSCRQLKT LFLEESLIVE
KDGQWLHELA VNNSVMETLN FYMTDLVKVS FEDLELIARN CRNLASVKIS DCEILDLVGF
FPAAAVLEEF CGGSFNEQPD RYYAVSFPPK LCRLGLTYMG KNEMPIVFPF ASLLKKLDLL
YALLDTEDHC LLIQRCPNLE VLETRNVIGD RGLEVLARSC KRLKRLRIER GADEQGMEDE
EGVVSQRGLM ALAQGCLELE YLAVYVSDIT NASLEYIGTY SKNLSDFRLV LLDREERITD
LPLDNGVRAL LRGCEKLRRF ALYLRPGGLT DVGLSYIGQY SPNVRWMLLG YVGESDAGLL
EFSKGCPSLQ KLEMRGCCFS EHALAVTVMQ LTSLRYLWVQ GYRASQSGRD LLAMARPFWN
IELIPARRVV MNDQVGEAVV VEHPAHILAY YSLAGPRTDF PETVIPLDPL VAA
//
