ID A0A061FQF4_THECC Unreviewed; 302 AA.
AC A0A061FQF4;
DT 03-SEP-2014, integrated into UniProtKB/TrEMBL.
DT 03-SEP-2014, sequence version 1.
DT 27-MAR-2024, entry version 41.
DE SubName: Full=Global transcription factor group, putative isoform 1 {ECO:0000313|EMBL:EOY19550.1};
GN ORFNames=TCM_044683 {ECO:0000313|EMBL:EOY19550.1};
OS Theobroma cacao (Cacao) (Cocoa).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma.
OX NCBI_TaxID=3641 {ECO:0000313|EMBL:EOY19550.1, ECO:0000313|Proteomes:UP000026915};
RN [1] {ECO:0000313|EMBL:EOY19550.1, ECO:0000313|Proteomes:UP000026915}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Matina 1-6 {ECO:0000313|Proteomes:UP000026915};
RX PubMed=23731509; DOI=10.1186/gb-2013-14-6-r53;
RA Motamayor J.C., Mockaitis K., Schmutz J., Haiminen N., Iii D.L.,
RA Cornejo O., Findley S.D., Zheng P., Utro F., Royaert S., Saski C.,
RA Jenkins J., Podicheti R., Zhao M., Scheffler B.E., Stack J.C., Feltus F.A.,
RA Mustiga G.M., Amores F., Phillips W., Marelli J.P., May G.D., Shapiro H.,
RA Ma J., Bustamante C.D., Schnell R.J., Main D., Gilbert D., Parida L.,
RA Kuhn D.N.;
RT "The genome sequence of the most widely cultivated cacao type and its use
RT to identify candidate genes regulating pod color.";
RL Genome Biol. 14:R53.1-R53.24(2013).
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DR EMBL; CM001888; EOY19550.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A061FQF4; -.
DR STRING; 3641.A0A061FQF4; -.
DR EnsemblPlants; EOY19550; EOY19550; TCM_044683.
DR Gramene; EOY19550; EOY19550; TCM_044683.
DR eggNOG; KOG1856; Eukaryota.
DR InParanoid; A0A061FQF4; -.
DR Proteomes; UP000026915; Chromosome 10.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0140673; P:transcription elongation-coupled chromatin remodeling; IEA:InterPro.
DR CDD; cd09918; SH2_Nterm_SPT6_like; 1.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR Gene3D; 3.30.505.10; SH2 domain; 2.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR003029; S1_domain.
DR InterPro; IPR036860; SH2_dom_sf.
DR InterPro; IPR049540; Spt6-like_S1.
DR InterPro; IPR035420; Spt6_SH2.
DR InterPro; IPR035019; Spt6_SH2_N.
DR InterPro; IPR017072; TF_Spt6.
DR PANTHER; PTHR10145; TRANSCRIPTION ELONGATION FACTOR SPT6; 1.
DR PANTHER; PTHR10145:SF6; TRANSCRIPTION ELONGATION FACTOR SPT6; 1.
DR Pfam; PF14633; SH2_2; 1.
DR Pfam; PF21710; Spt6_S1; 1.
DR SMART; SM00316; S1; 1.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
DR SUPFAM; SSF55550; SH2 domain; 1.
DR PROSITE; PS50126; S1; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000026915}.
FT DOMAIN 13..83
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
SQ SEQUENCE 302 AA; 34925 MW; 3C6FBA08DA0903A2 CRC64;
MICGKNGTAL AEGSLVLAIV RHVESQRAFC VLDSGLTGII MKDDFSDEDG DFALEDKLHE
GDKVSCKVKQ IDKSTFQAFL TCKESEVKRS RYEDILEVDP YYHESGNILL NQQEKACMDE
KLDKKHFKPR TISHPFFRNM TLDQAMEFLS DKDAGESIFR PSSRGPSYLT LTLKVFDELY
LSKDIVESGK DHKDMTSLLH LGKVLKIGND KFRDLDEVRD RYVIPLVKHL KEMLGFQKFK
RGAKSEVDEV LRAEKLEYPM RVVYCFGISY EHPGTFILSY IKSRNLHHES MYNWWFARPV
EL
//
