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Database: UniProt
Entry: A0A061FUN3_THECC
LinkDB: A0A061FUN3_THECC
Original site: A0A061FUN3_THECC 
ID   A0A061FUN3_THECC        Unreviewed;       356 AA.
AC   A0A061FUN3;
DT   03-SEP-2014, integrated into UniProtKB/TrEMBL.
DT   03-SEP-2014, sequence version 1.
DT   24-JAN-2024, entry version 44.
DE   SubName: Full=DP-E2F-like 1 isoform 2 {ECO:0000313|EMBL:EOY20592.1};
GN   ORFNames=TCM_011971 {ECO:0000313|EMBL:EOY20592.1};
OS   Theobroma cacao (Cacao) (Cocoa).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma.
OX   NCBI_TaxID=3641 {ECO:0000313|EMBL:EOY20592.1, ECO:0000313|Proteomes:UP000026915};
RN   [1] {ECO:0000313|EMBL:EOY20592.1, ECO:0000313|Proteomes:UP000026915}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Matina 1-6 {ECO:0000313|Proteomes:UP000026915};
RX   PubMed=23731509; DOI=10.1186/gb-2013-14-6-r53;
RA   Motamayor J.C., Mockaitis K., Schmutz J., Haiminen N., Iii D.L.,
RA   Cornejo O., Findley S.D., Zheng P., Utro F., Royaert S., Saski C.,
RA   Jenkins J., Podicheti R., Zhao M., Scheffler B.E., Stack J.C., Feltus F.A.,
RA   Mustiga G.M., Amores F., Phillips W., Marelli J.P., May G.D., Shapiro H.,
RA   Ma J., Bustamante C.D., Schnell R.J., Main D., Gilbert D., Parida L.,
RA   Kuhn D.N.;
RT   "The genome sequence of the most widely cultivated cacao type and its use
RT   to identify candidate genes regulating pod color.";
RL   Genome Biol. 14:R53.1-R53.24(2013).
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|RuleBase:RU003796}.
CC   -!- SIMILARITY: Belongs to the E2F/DP family.
CC       {ECO:0000256|RuleBase:RU003796}.
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DR   EMBL; CM001881; EOY20592.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A061FUN3; -.
DR   EnsemblPlants; EOY20592; EOY20592; TCM_011971.
DR   Gramene; EOY20592; EOY20592; TCM_011971.
DR   Proteomes; UP000026915; Chromosome 3.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR   GO; GO:0005667; C:transcription regulator complex; IEA:InterPro.
DR   GO; GO:0000978; F:RNA polymerase II cis-regulatory region sequence-specific DNA binding; IEA:InterPro.
DR   GO; GO:0007049; P:cell cycle; IEA:UniProtKB-KW.
DR   GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IEA:InterPro.
DR   Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 2.
DR   InterPro; IPR015633; E2F.
DR   InterPro; IPR003316; E2F_WHTH_DNA-bd_dom.
DR   InterPro; IPR036388; WH-like_DNA-bd_sf.
DR   InterPro; IPR036390; WH_DNA-bd_sf.
DR   PANTHER; PTHR12081; TRANSCRIPTION FACTOR E2F; 1.
DR   PANTHER; PTHR12081:SF7; TRANSCRIPTION FACTOR EFL-3; 1.
DR   Pfam; PF02319; E2F_TDP; 2.
DR   SMART; SM01372; E2F_TDP; 2.
DR   SUPFAM; SSF46785; Winged helix' DNA-binding domain; 2.
PE   3: Inferred from homology;
KW   DNA-binding {ECO:0000256|ARBA:ARBA00023125, ECO:0000256|RuleBase:RU003796};
KW   Nucleus {ECO:0000256|RuleBase:RU003796};
KW   Reference proteome {ECO:0000313|Proteomes:UP000026915};
KW   Transcription {ECO:0000256|ARBA:ARBA00023163,
KW   ECO:0000256|RuleBase:RU003796};
KW   Transcription regulation {ECO:0000256|RuleBase:RU003796}.
FT   DOMAIN          1..54
FT                   /note="E2F/DP family winged-helix DNA-binding"
FT                   /evidence="ECO:0000259|SMART:SM01372"
FT   DOMAIN          127..207
FT                   /note="E2F/DP family winged-helix DNA-binding"
FT                   /evidence="ECO:0000259|SMART:SM01372"
FT   REGION          81..122
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        99..121
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   NON_TER         1
FT                   /evidence="ECO:0000313|EMBL:EOY20592.1"
SQ   SEQUENCE   356 AA;  40073 MW;  DDCC8B49288EEE6A CRC64;
     FLSLYNREDV ELIGLDEAAA KLGVERHRIY DIVNVLESVG VLTRKAKNKY TWKGFAAIPK
     ALQDLKEEGF SSNFKNLDAN NNAKVSDDDD DDEDDEGFSN PNTGSQTETS KPTSVLKSSA
     SSKIDNRREK SLGLLTQNFV KLFVCSNAEL ISLDEAARLL LGNAHNTSIM RTKVRRLYDI
     ANVLSSMNLI EKTHTVDTRK PAFRWLGLSG KSDKGSADAL VLHESRKRAF GTDVTNIISK
     RNKVDSSNEG NVKQCMKMQK QIKVENLVAV ADRRSWEDSK QGSKSYQFGP FAPVNLSRSG
     NSENNVKRVH DWESLASTYR PQYHNQALRD LFSHYMEAWK SWYTEVAGKK PIQQIS
//
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