ID A0A061FXL1_THECC Unreviewed; 494 AA.
AC A0A061FXL1;
DT 03-SEP-2014, integrated into UniProtKB/TrEMBL.
DT 03-SEP-2014, sequence version 1.
DT 27-MAR-2024, entry version 41.
DE RecName: Full=Spt6 SH2 domain-containing protein {ECO:0000259|Pfam:PF14633};
GN ORFNames=TCM_044682 {ECO:0000313|EMBL:EOY19549.1};
OS Theobroma cacao (Cacao) (Cocoa).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma.
OX NCBI_TaxID=3641 {ECO:0000313|EMBL:EOY19549.1, ECO:0000313|Proteomes:UP000026915};
RN [1] {ECO:0000313|EMBL:EOY19549.1, ECO:0000313|Proteomes:UP000026915}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Matina 1-6 {ECO:0000313|Proteomes:UP000026915};
RX PubMed=23731509; DOI=10.1186/gb-2013-14-6-r53;
RA Motamayor J.C., Mockaitis K., Schmutz J., Haiminen N., Iii D.L.,
RA Cornejo O., Findley S.D., Zheng P., Utro F., Royaert S., Saski C.,
RA Jenkins J., Podicheti R., Zhao M., Scheffler B.E., Stack J.C., Feltus F.A.,
RA Mustiga G.M., Amores F., Phillips W., Marelli J.P., May G.D., Shapiro H.,
RA Ma J., Bustamante C.D., Schnell R.J., Main D., Gilbert D., Parida L.,
RA Kuhn D.N.;
RT "The genome sequence of the most widely cultivated cacao type and its use
RT to identify candidate genes regulating pod color.";
RL Genome Biol. 14:R53.1-R53.24(2013).
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; CM001888; EOY19549.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A061FXL1; -.
DR STRING; 3641.A0A061FXL1; -.
DR EnsemblPlants; EOY19549; EOY19549; TCM_044682.
DR Gramene; EOY19549; EOY19549; TCM_044682.
DR eggNOG; KOG1856; Eukaryota.
DR HOGENOM; CLU_552542_0_0_1; -.
DR InParanoid; A0A061FXL1; -.
DR OMA; TAHSGAC; -.
DR Proteomes; UP000026915; Chromosome 10.
DR GO; GO:0140673; P:transcription elongation-coupled chromatin remodeling; IEA:InterPro.
DR CDD; cd09928; SH2_Cterm_SPT6_like; 1.
DR Gene3D; 3.30.505.10; SH2 domain; 1.
DR InterPro; IPR036860; SH2_dom_sf.
DR InterPro; IPR035420; Spt6_SH2.
DR InterPro; IPR035018; Spt6_SH2_C.
DR InterPro; IPR017072; TF_Spt6.
DR PANTHER; PTHR10145; TRANSCRIPTION ELONGATION FACTOR SPT6; 1.
DR PANTHER; PTHR10145:SF6; TRANSCRIPTION ELONGATION FACTOR SPT6; 1.
DR Pfam; PF14633; SH2_2; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000026915}.
FT DOMAIN 2..58
FT /note="Spt6 SH2"
FT /evidence="ECO:0000259|Pfam:PF14633"
FT REGION 102..272
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 386..494
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 102..120
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 127..146
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 159..175
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 253..272
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 440..454
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 468..482
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 494 AA; 52208 MW; 9E4B779C985DE55C CRC64;
MRVVYCFGIS YEHPGTFILS YIKSRNLHHE YVGLLPNGFK FRKQTFEKIE HLVGLFQKNI
DRLQHTSLTL GNLAFGNSSG ACTIGGLQGQ LNCSKDRSIS RGRSFYHGDG NDDGGKMHPS
ELPRPHNGSG HDSSNDGFNS FGNEDKDPSQ GAAAKWGSCS EDQDRRNEKW GRTNNKLGND
IHFAPNNEDW PGGWSDGVGA SGRNWDSGDR RGSGGNWDRN DGTRNSGWSK GIGVDRTGGK
WGQRGGRGSR GGCTSGWGST KNGDSSGSDE VWRASGNNVH VRGRAHTSGW GATKESESGG
NFGYNEGDWP VSGNNVGGHR HHGGGRGRGC GCGFRCGHGG SSCWGGTKEG ESSASFGGDE
GAWHTTGNNV WGRGRHGAGC GGGRMSGWGG SKEGESGGTF DGNGEDWHAS GNNVGGHGHC
GGGRDHGPGR GRGRGRGRGR GRAGSWDCDR GGHRGGARNA CSFGRGRGRS NERGDNCHRE
SESGHNSSMV NGGW
//
