ID A0A061G6L1_THECC Unreviewed; 467 AA.
AC A0A061G6L1;
DT 03-SEP-2014, integrated into UniProtKB/TrEMBL.
DT 03-SEP-2014, sequence version 1.
DT 27-MAR-2024, entry version 45.
DE SubName: Full=Pectin lyase-like superfamily protein isoform 1 {ECO:0000313|EMBL:EOY24837.1};
GN ORFNames=TCM_016327 {ECO:0000313|EMBL:EOY24837.1};
OS Theobroma cacao (Cacao) (Cocoa).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma.
OX NCBI_TaxID=3641 {ECO:0000313|EMBL:EOY24837.1, ECO:0000313|Proteomes:UP000026915};
RN [1] {ECO:0000313|EMBL:EOY24837.1, ECO:0000313|Proteomes:UP000026915}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Matina 1-6 {ECO:0000313|Proteomes:UP000026915};
RX PubMed=23731509; DOI=10.1186/gb-2013-14-6-r53;
RA Motamayor J.C., Mockaitis K., Schmutz J., Haiminen N., Iii D.L.,
RA Cornejo O., Findley S.D., Zheng P., Utro F., Royaert S., Saski C.,
RA Jenkins J., Podicheti R., Zhao M., Scheffler B.E., Stack J.C., Feltus F.A.,
RA Mustiga G.M., Amores F., Phillips W., Marelli J.P., May G.D., Shapiro H.,
RA Ma J., Bustamante C.D., Schnell R.J., Main D., Gilbert D., Parida L.,
RA Kuhn D.N.;
RT "The genome sequence of the most widely cultivated cacao type and its use
RT to identify candidate genes regulating pod color.";
RL Genome Biol. 14:R53.1-R53.24(2013).
CC -!- SIMILARITY: Belongs to the glycosyl hydrolase 28 family.
CC {ECO:0000256|ARBA:ARBA00008834, ECO:0000256|RuleBase:RU361169}.
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DR EMBL; CM001881; EOY24836.1; -; Genomic_DNA.
DR EMBL; CM001881; EOY24837.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A061G6L1; -.
DR EnsemblPlants; EOY24836; EOY24836; TCM_016327.
DR EnsemblPlants; EOY24837; EOY24837; TCM_016327.
DR Gramene; EOY24836; EOY24836; TCM_016327.
DR Gramene; EOY24837; EOY24837; TCM_016327.
DR eggNOG; ENOG502QPMF; Eukaryota.
DR HOGENOM; CLU_016031_8_0_1; -.
DR InParanoid; A0A061G6L1; -.
DR OMA; VGDDCIT; -.
DR Proteomes; UP000026915; Chromosome 3.
DR GO; GO:0016829; F:lyase activity; IEA:UniProtKB-KW.
DR GO; GO:0004650; F:polygalacturonase activity; IEA:InterPro.
DR GO; GO:0005975; P:carbohydrate metabolic process; IEA:InterPro.
DR Gene3D; 2.160.20.10; Single-stranded right-handed beta-helix, Pectin lyase-like; 1.
DR InterPro; IPR000743; Glyco_hydro_28.
DR InterPro; IPR024535; Pectate_lyase_SF_prot.
DR InterPro; IPR012334; Pectin_lyas_fold.
DR InterPro; IPR011050; Pectin_lyase_fold/virulence.
DR PANTHER; PTHR31339:SF71; PECTIN LYASE-LIKE SUPERFAMILY PROTEIN; 1.
DR PANTHER; PTHR31339; PECTIN LYASE-RELATED; 1.
DR Pfam; PF00295; Glyco_hydro_28; 1.
DR Pfam; PF12708; Pectate_lyase_3; 1.
DR SUPFAM; SSF51126; Pectin lyase-like; 1.
PE 3: Inferred from homology;
KW Glycosidase {ECO:0000256|ARBA:ARBA00023295, ECO:0000256|RuleBase:RU361169};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801, ECO:0000256|RuleBase:RU361169};
KW Lyase {ECO:0000313|EMBL:EOY24837.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000026915};
KW Signal {ECO:0000256|SAM:SignalP}.
FT SIGNAL 1..32
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 33..467
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5007370466"
FT DOMAIN 57..110
FT /note="Pectate lyase superfamily protein"
FT /evidence="ECO:0000259|Pfam:PF12708"
SQ SEQUENCE 467 AA; 50736 MW; 631570AAD12021FE CRC64;
MWTTPRRNLQ VLDTLVLLGL VLVLINVNGV ESRTVRILDS FGYPVTGCSR KYSASLADFG
GVGDGVSSNT KAFQAAIDNL SQYASDGGSL LFVPPGKWLT GSFNLTSHFT LYLHKDATLL
ASQDESEWAV IDPLPSYGRG RDAVGGRYIS LIFGTNLTDV VVTGDNGTIH GQGTTWWDKF
HKGELKYTRP YLIEIMYSDQ VQISSLTLMD SPSWNVHPIY SSNVVVQGLT IVAPVTSPNT
DGINPDSCTN TRIEDCYIVS GDDCVAVKSG WDEYGIKFAM PTKQLVIRRL TCISPFSAVI
ALGSEMSGGI EDVRAEDITG INSESAVRIK TAVGRGNYVK DIYVRGMTMK TMKMVFWMAG
NYGSHPDNDY DPNAIPVIQN INFRDVVAEN VTMAARLEGI PGHPFTGICI SNATIGLTKK
PKKIQWNCTE IAGVSSDVTP PPCNLLTDQG PANACDFPED SFPSVKL
//
