ID A0A061G8S5_THECC Unreviewed; 360 AA.
AC A0A061G8S5;
DT 03-SEP-2014, integrated into UniProtKB/TrEMBL.
DT 03-SEP-2014, sequence version 1.
DT 27-MAR-2024, entry version 30.
DE SubName: Full=Pentatricopeptide repeat (PPR) superfamily protein isoform 3 {ECO:0000313|EMBL:EOY25971.1};
GN ORFNames=TCM_027343 {ECO:0000313|EMBL:EOY25971.1};
OS Theobroma cacao (Cacao) (Cocoa).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma.
OX NCBI_TaxID=3641 {ECO:0000313|EMBL:EOY25971.1, ECO:0000313|Proteomes:UP000026915};
RN [1] {ECO:0000313|EMBL:EOY25971.1, ECO:0000313|Proteomes:UP000026915}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Matina 1-6 {ECO:0000313|Proteomes:UP000026915};
RX PubMed=23731509; DOI=10.1186/gb-2013-14-6-r53;
RA Motamayor J.C., Mockaitis K., Schmutz J., Haiminen N., Iii D.L.,
RA Cornejo O., Findley S.D., Zheng P., Utro F., Royaert S., Saski C.,
RA Jenkins J., Podicheti R., Zhao M., Scheffler B.E., Stack J.C., Feltus F.A.,
RA Mustiga G.M., Amores F., Phillips W., Marelli J.P., May G.D., Shapiro H.,
RA Ma J., Bustamante C.D., Schnell R.J., Main D., Gilbert D., Parida L.,
RA Kuhn D.N.;
RT "The genome sequence of the most widely cultivated cacao type and its use
RT to identify candidate genes regulating pod color.";
RL Genome Biol. 14:R53.1-R53.24(2013).
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily.
CC {ECO:0000256|ARBA:ARBA00007626}.
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DR EMBL; CM001884; EOY25971.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A061G8S5; -.
DR EnsemblPlants; EOY25971; EOY25971; TCM_027343.
DR Gramene; EOY25971; EOY25971; TCM_027343.
DR HOGENOM; CLU_002706_49_20_1; -.
DR Proteomes; UP000026915; Chromosome 6.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 4.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 4.
DR PANTHER; PTHR47936:SF1; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN GUN1, CHLOROPLASTIC; 1.
DR PANTHER; PTHR47936; PPR_LONG DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF01535; PPR; 1.
DR Pfam; PF13041; PPR_2; 2.
DR Pfam; PF13812; PPR_3; 1.
DR PROSITE; PS51375; PPR; 5.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000026915};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 102..136
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 137..171
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 172..206
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 207..241
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 309..343
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REGION 339..360
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 360 AA; 41942 MW; 428EC440F5152C3D CRC64;
MLDILGKSFE FDLSWDLIDR MKNKPCSIPD HATFRILFKR YITAHLVKEA ISTFDRLEEF
NLKDEISFCN LVDALCEYKH VIEAQELCFF GKIKEIGLSV NDTKIHNMIL RGWFKMGWWS
KCREFWQEMD KKGVKKDLHS YSIYMDIMCK SGKPWKAVKL YKEMKKKGMK LDVVAYNTVI
RAIGISEGAD FGVGVFREMR DLGCEPNVVT YNTVIKLLCE NGRVRQAYAV LDQMLKKDCA
PDVITYHCFF GCLEKPREIL KLFDLMITNG IQPRMDTYVM LMRKFGRWGF LRPVFMVWKK
MEELGSSPNE FAYNALIDAL IQKGMLDMAR KYDEEMLEKG LSSKPREELG TKLVQGGEDT
//
