ID A0A061GAV0_THECC Unreviewed; 318 AA.
AC A0A061GAV0;
DT 03-SEP-2014, integrated into UniProtKB/TrEMBL.
DT 03-SEP-2014, sequence version 1.
DT 27-MAR-2024, entry version 37.
DE RecName: Full=CCHC-type domain-containing protein {ECO:0000259|PROSITE:PS50158};
GN ORFNames=TCM_028976 {ECO:0000313|EMBL:EOY27025.1};
OS Theobroma cacao (Cacao) (Cocoa).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma.
OX NCBI_TaxID=3641 {ECO:0000313|EMBL:EOY27025.1, ECO:0000313|Proteomes:UP000026915};
RN [1] {ECO:0000313|EMBL:EOY27025.1, ECO:0000313|Proteomes:UP000026915}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Matina 1-6 {ECO:0000313|Proteomes:UP000026915};
RX PubMed=23731509; DOI=10.1186/gb-2013-14-6-r53;
RA Motamayor J.C., Mockaitis K., Schmutz J., Haiminen N., Iii D.L.,
RA Cornejo O., Findley S.D., Zheng P., Utro F., Royaert S., Saski C.,
RA Jenkins J., Podicheti R., Zhao M., Scheffler B.E., Stack J.C., Feltus F.A.,
RA Mustiga G.M., Amores F., Phillips W., Marelli J.P., May G.D., Shapiro H.,
RA Ma J., Bustamante C.D., Schnell R.J., Main D., Gilbert D., Parida L.,
RA Kuhn D.N.;
RT "The genome sequence of the most widely cultivated cacao type and its use
RT to identify candidate genes regulating pod color.";
RL Genome Biol. 14:R53.1-R53.24(2013).
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DR EMBL; CM001884; EOY27025.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A061GAV0; -.
DR STRING; 3641.A0A061GAV0; -.
DR EnsemblPlants; EOY27025; EOY27025; TCM_028976.
DR Gramene; EOY27025; EOY27025; TCM_028976.
DR eggNOG; KOG0017; Eukaryota.
DR HOGENOM; CLU_071438_0_0_1; -.
DR InParanoid; A0A061GAV0; -.
DR OMA; STIFFME; -.
DR Proteomes; UP000026915; Chromosome 6.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR InterPro; IPR029472; Copia-like_N.
DR InterPro; IPR001878; Znf_CCHC.
DR InterPro; IPR036875; Znf_CCHC_sf.
DR PANTHER; PTHR37610; CCHC-TYPE DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR37610:SF101; RETROTRANSPOSON COPIA-LIKE N-TERMINAL DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF14244; Retrotran_gag_3; 1.
DR SUPFAM; SSF57756; Retrovirus zinc finger-like domains; 1.
DR PROSITE; PS50158; ZF_CCHC; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00047};
KW Reference proteome {ECO:0000313|Proteomes:UP000026915};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00047};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00047}.
FT DOMAIN 273..286
FT /note="CCHC-type"
FT /evidence="ECO:0000259|PROSITE:PS50158"
FT REGION 1..22
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 318 AA; 36439 MW; 9C19AFE94D6139CA CRC64;
MSELSESTTR NTAPNPQLTS QISQANDPPS PYYLHHTDHL GSVVVNPKLT TNNYVAWSRS
FLLALSIRNK VGFINGSIPK PSITDDLHPI WNRCNNLIVS WLLNSISQPI ASTIFFMESV
AEIWNTLKLN YAQPDNTCVC NLQYTLGSVT QRVKIVYAYF IELKCIWEEL RNYRPLPHCE
CGKCNANCFK KFSDQYQKDM VFRFLNGLNE SFSAIRSQII LMDPIPSLDK VYSMVLREES
QKNMFLQSQP FLESLAMLAA TNVKKKPMKD LTCTHCGKKG HVKEKCYRII RFPEDFKFTK
GKPYVKKGAA VKQCYYNG
//
