ID A0A061GD71_THECC Unreviewed; 279 AA.
AC A0A061GD71;
DT 03-SEP-2014, integrated into UniProtKB/TrEMBL.
DT 03-SEP-2014, sequence version 1.
DT 24-JAN-2024, entry version 41.
DE SubName: Full=Inorganic pyrophosphatase 2 {ECO:0000313|EMBL:EOY27092.1};
GN ORFNames=TCM_029026 {ECO:0000313|EMBL:EOY27092.1};
OS Theobroma cacao (Cacao) (Cocoa).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma.
OX NCBI_TaxID=3641 {ECO:0000313|EMBL:EOY27092.1, ECO:0000313|Proteomes:UP000026915};
RN [1] {ECO:0000313|EMBL:EOY27092.1, ECO:0000313|Proteomes:UP000026915}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Matina 1-6 {ECO:0000313|Proteomes:UP000026915};
RX PubMed=23731509; DOI=10.1186/gb-2013-14-6-r53;
RA Motamayor J.C., Mockaitis K., Schmutz J., Haiminen N., Iii D.L.,
RA Cornejo O., Findley S.D., Zheng P., Utro F., Royaert S., Saski C.,
RA Jenkins J., Podicheti R., Zhao M., Scheffler B.E., Stack J.C., Feltus F.A.,
RA Mustiga G.M., Amores F., Phillips W., Marelli J.P., May G.D., Shapiro H.,
RA Ma J., Bustamante C.D., Schnell R.J., Main D., Gilbert D., Parida L.,
RA Kuhn D.N.;
RT "The genome sequence of the most widely cultivated cacao type and its use
RT to identify candidate genes regulating pod color.";
RL Genome Biol. 14:R53.1-R53.24(2013).
CC -!- COFACTOR:
CC Name=Mg(2+); Xref=ChEBI:CHEBI:18420;
CC Evidence={ECO:0000256|ARBA:ARBA00001946,
CC ECO:0000256|PIRSR:PIRSR031051-3};
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DR EMBL; CM001884; EOY27092.1; -; Genomic_DNA.
DR RefSeq; XP_007024470.1; XM_007024408.2.
DR AlphaFoldDB; A0A061GD71; -.
DR STRING; 3641.A0A061GD71; -.
DR EnsemblPlants; EOY27092; EOY27092; TCM_029026.
DR EnsemblPlants; Tc06v2_t009020.1; Tc06v2_p009020.1; Tc06v2_g009020.
DR GeneID; 18596127; -.
DR Gramene; EOY27092; EOY27092; TCM_029026.
DR Gramene; Tc06v2_t009020.1; Tc06v2_p009020.1; Tc06v2_g009020.
DR KEGG; tcc:18596127; -.
DR eggNOG; KOG3120; Eukaryota.
DR HOGENOM; CLU_068983_1_1_1; -.
DR InParanoid; A0A061GD71; -.
DR OMA; KAEICEW; -.
DR OrthoDB; 372892at2759; -.
DR Proteomes; UP000026915; Chromosome 6.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0016791; F:phosphatase activity; IBA:GO_Central.
DR Gene3D; 3.40.50.1000; HAD superfamily/HAD-like; 1.
DR InterPro; IPR036412; HAD-like_sf.
DR InterPro; IPR006384; HAD_hydro_PyrdxlP_Pase-like.
DR InterPro; IPR023214; HAD_sf.
DR InterPro; IPR016965; Pase_PHOSPHO-typ.
DR NCBIfam; TIGR01489; DKMTPPase-SF; 1.
DR NCBIfam; TIGR01488; HAD-SF-IB; 1.
DR PANTHER; PTHR20889:SF16; INORGANIC PYROPHOSPHATASE 2-LIKE; 1.
DR PANTHER; PTHR20889; PHOSPHATASE, ORPHAN 1, 2; 1.
DR Pfam; PF06888; Put_Phosphatase; 1.
DR PIRSF; PIRSF031051; PyrdxlP_Pase_PHOSPHO2; 1.
DR SUPFAM; SSF56784; HAD-like; 1.
PE 4: Predicted;
KW Magnesium {ECO:0000256|ARBA:ARBA00022842, ECO:0000256|PIRSR:PIRSR031051-3};
KW Metal-binding {ECO:0000256|PIRSR:PIRSR031051-3};
KW Reference proteome {ECO:0000313|Proteomes:UP000026915}.
FT ACT_SITE 9
FT /note="Nucleophile"
FT /evidence="ECO:0000256|PIRSR:PIRSR031051-1"
FT ACT_SITE 11
FT /note="Proton donor"
FT /evidence="ECO:0000256|PIRSR:PIRSR031051-1"
FT BINDING 9
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /evidence="ECO:0000256|PIRSR:PIRSR031051-3"
FT BINDING 11
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /evidence="ECO:0000256|PIRSR:PIRSR031051-3"
FT BINDING 20
FT /ligand="substrate"
FT /evidence="ECO:0000256|PIRSR:PIRSR031051-2"
FT BINDING 95
FT /ligand="substrate"
FT /evidence="ECO:0000256|PIRSR:PIRSR031051-2"
FT BINDING 179
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /evidence="ECO:0000256|PIRSR:PIRSR031051-3"
SQ SEQUENCE 279 AA; 31802 MW; B6DC3C5BF6C05514 CRC64;
MVDIVVIFDF DKTIIDCDSD NWVLDELGAT KLFNQLLPTM PWNPLMDRMM KELHSQGTKI
EDIKAVLKRT PIHPRIIQAI KSAYALGCDL KIVSDANAFF IETILKHHGL REYFSEINTN
PGFVDEEGRL RIFPHHDFTQ SPHGCHHPCP PNMCKGTVIE RIQASMSMKG KKTIIYLGDG
VGDFCPSLKL GDGDYVMPRK NFPVWDLICE NRRLIKAEIC EWSNGEEFEH VLLHVINRIS
IDRNNSDNTA RLYSIDCKLQ TLPGAAQEKA FSHALYVPH
//