ID A0A061GDI8_THECC Unreviewed; 363 AA.
AC A0A061GDI8;
DT 03-SEP-2014, integrated into UniProtKB/TrEMBL.
DT 03-SEP-2014, sequence version 1.
DT 27-MAR-2024, entry version 36.
DE SubName: Full=RING/FYVE/PHD zinc finger superfamily protein, putative {ECO:0000313|EMBL:EOY27960.1};
GN ORFNames=TCM_029667 {ECO:0000313|EMBL:EOY27960.1};
OS Theobroma cacao (Cacao) (Cocoa).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma.
OX NCBI_TaxID=3641 {ECO:0000313|EMBL:EOY27960.1, ECO:0000313|Proteomes:UP000026915};
RN [1] {ECO:0000313|EMBL:EOY27960.1, ECO:0000313|Proteomes:UP000026915}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Matina 1-6 {ECO:0000313|Proteomes:UP000026915};
RX PubMed=23731509; DOI=10.1186/gb-2013-14-6-r53;
RA Motamayor J.C., Mockaitis K., Schmutz J., Haiminen N., Iii D.L.,
RA Cornejo O., Findley S.D., Zheng P., Utro F., Royaert S., Saski C.,
RA Jenkins J., Podicheti R., Zhao M., Scheffler B.E., Stack J.C., Feltus F.A.,
RA Mustiga G.M., Amores F., Phillips W., Marelli J.P., May G.D., Shapiro H.,
RA Ma J., Bustamante C.D., Schnell R.J., Main D., Gilbert D., Parida L.,
RA Kuhn D.N.;
RT "The genome sequence of the most widely cultivated cacao type and its use
RT to identify candidate genes regulating pod color.";
RL Genome Biol. 14:R53.1-R53.24(2013).
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DR EMBL; CM001884; EOY27960.1; -; Genomic_DNA.
DR RefSeq; XP_007025338.1; XM_007025276.2.
DR AlphaFoldDB; A0A061GDI8; -.
DR STRING; 3641.A0A061GDI8; -.
DR EnsemblPlants; EOY27960; EOY27960; TCM_029667.
DR EnsemblPlants; Tc06v2_t013770.1; Tc06v2_p013770.1; Tc06v2_g013770.
DR GeneID; 18596659; -.
DR Gramene; EOY27960; EOY27960; TCM_029667.
DR Gramene; Tc06v2_t013770.1; Tc06v2_p013770.1; Tc06v2_g013770.
DR KEGG; tcc:18596659; -.
DR eggNOG; KOG1609; Eukaryota.
DR HOGENOM; CLU_062126_0_0_1; -.
DR InParanoid; A0A061GDI8; -.
DR OMA; FIEDWHD; -.
DR OrthoDB; 318778at2759; -.
DR Proteomes; UP000026915; Chromosome 6.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR011016; Znf_RING-CH.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR46214:SF8; RING_FYVE_PHD ZINC FINGER SUPERFAMILY PROTEIN; 1.
DR PANTHER; PTHR46214; ZINC FINGER, RING-CH-TYPE; 1.
DR Pfam; PF12906; RINGv; 1.
DR SMART; SM00744; RINGv; 1.
DR SUPFAM; SSF57850; RING/U-box; 1.
DR PROSITE; PS51292; ZF_RING_CH; 1.
PE 4: Predicted;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000026915};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 340..358
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 228..303
FT /note="RING-CH-type"
FT /evidence="ECO:0000259|PROSITE:PS51292"
FT REGION 1..31
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..15
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 16..31
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 363 AA; 39397 MW; 400543645547D1AF CRC64;
MDQEERGDRV ETSENLSQVE EGVSGDSKNP VNGVVSETVI VINAEENVCF SRENADVRLQ
NDGFGSLKDQ EVDYGRGIGP PLIQNDLGSG GHSSSFADRN VLENEERDLG DKNNGVVSTE
VLGEAGGEMF DQETNQMGGV GETTGQVDQG SSRSLNNSVD RFVVETIIVV NTQEATCVDG
SNRLEVKDNG LGSSKVMTER PKTKVAEAED SCVIDIKGSD GGGRQYKESW DGERVCRICH
LTTEQSLEST DITFSTAATM DLIQLGCGCK DELGIAHSHC AEAWFKLKGN RMCEICGQTA
KNITGVRDNR FIEDWHDQGS TSGGGISSDR GGGCWRGQPF CNFLMACLVI AFVLPWFFRV
NMF
//
