ID A0A061GDV3_THECC Unreviewed; 872 AA.
AC A0A061GDV3;
DT 03-SEP-2014, integrated into UniProtKB/TrEMBL.
DT 03-SEP-2014, sequence version 1.
DT 27-MAR-2024, entry version 50.
DE SubName: Full=Jumonji domain protein isoform 1 {ECO:0000313|EMBL:EOY25189.1};
GN ORFNames=TCM_016586 {ECO:0000313|EMBL:EOY25189.1};
OS Theobroma cacao (Cacao) (Cocoa).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma.
OX NCBI_TaxID=3641 {ECO:0000313|EMBL:EOY25189.1, ECO:0000313|Proteomes:UP000026915};
RN [1] {ECO:0000313|EMBL:EOY25189.1, ECO:0000313|Proteomes:UP000026915}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Matina 1-6 {ECO:0000313|Proteomes:UP000026915};
RX PubMed=23731509; DOI=10.1186/gb-2013-14-6-r53;
RA Motamayor J.C., Mockaitis K., Schmutz J., Haiminen N., Iii D.L.,
RA Cornejo O., Findley S.D., Zheng P., Utro F., Royaert S., Saski C.,
RA Jenkins J., Podicheti R., Zhao M., Scheffler B.E., Stack J.C., Feltus F.A.,
RA Mustiga G.M., Amores F., Phillips W., Marelli J.P., May G.D., Shapiro H.,
RA Ma J., Bustamante C.D., Schnell R.J., Main D., Gilbert D., Parida L.,
RA Kuhn D.N.;
RT "The genome sequence of the most widely cultivated cacao type and its use
RT to identify candidate genes regulating pod color.";
RL Genome Biol. 14:R53.1-R53.24(2013).
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DR EMBL; CM001881; EOY25189.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A061GDV3; -.
DR STRING; 3641.A0A061GDV3; -.
DR EnsemblPlants; EOY25189; EOY25189; TCM_016586.
DR Gramene; EOY25189; EOY25189; TCM_016586.
DR eggNOG; KOG1246; Eukaryota.
DR InParanoid; A0A061GDV3; -.
DR OMA; HETDCRT; -.
DR Proteomes; UP000026915; Chromosome 3.
DR GO; GO:0000785; C:chromatin; IBA:GO_Central.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0032452; F:histone demethylase activity; IBA:GO_Central.
DR GO; GO:0006338; P:chromatin remodeling; IBA:GO_Central.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:UniProt.
DR GO; GO:0010468; P:regulation of gene expression; IBA:GO_Central.
DR Gene3D; 2.60.120.650; Cupin; 1.
DR InterPro; IPR003347; JmjC_dom.
DR InterPro; IPR003349; JmjN.
DR InterPro; IPR004198; Znf_C5HC2.
DR PANTHER; PTHR10694; LYSINE-SPECIFIC DEMETHYLASE; 1.
DR PANTHER; PTHR10694:SF33; TRANSCRIPTION FACTOR JUMONJI (JMJ) FAMILY PROTEIN _ ZINC FINGER (C5HC2 TYPE) FAMILY PROTEIN; 1.
DR Pfam; PF02373; JmjC; 1.
DR Pfam; PF02375; JmjN; 1.
DR Pfam; PF02928; zf-C5HC2; 1.
DR SMART; SM00558; JmjC; 1.
DR SMART; SM00545; JmjN; 1.
DR SUPFAM; SSF51197; Clavaminate synthase-like; 1.
DR PROSITE; PS51184; JMJC; 1.
DR PROSITE; PS51183; JMJN; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000026915};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 102..143
FT /note="JmjN"
FT /evidence="ECO:0000259|PROSITE:PS51183"
FT DOMAIN 246..419
FT /note="JmjC"
FT /evidence="ECO:0000259|PROSITE:PS51184"
FT REGION 702..723
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 762..796
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 838..872
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 765..793
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 838..853
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 872 AA; 97617 MW; 30CB9F91C21D373A CRC64;
MVEGRVCLSK EAKNGLEFLK RKRLQRIKSE TVSGTSGVTN LMARSGGDAL RVSASCGMRL
PGNAESISSS NGASSERDVF SKRKVNKFDT SDLEWTEKIP ECPVYCPTKE EFEDPLVYLQ
QIAPEASKYG ICKIISPLSA TVPAGVVLMK ENVGFKFTTR VQPLRLAEWD TDDRVTFFMS
GRNYTFRDFE KMANKVFARR YCSAGCLPAT YMEKEFWHEI ACGKIESVEY ACDVEGSAFS
SSPSDPLGTS KWNLKKLSRL PKSILRLLET AIPGVTDPML YIGMLFSIFA WHVEDHYLYS
INYHHCGASK TWYGIPGHAA LKFEKVVKEH VYTNDILSTD GEDGAFDVLL GKTTLFPPNI
LLEHDVPVYK AVQKPGEFVI TFPRAYHAGF SHGFNCGEAV NFAVGDWFPL GAVASLRYAH
LNRVPLLPHE ELLCKEAMLL NTSLELEDLE YSAADLASHH SIKVSFVKLM RFLHRARWSV
MKSRACSSIS PNYYRTVVCT LCKRDCYVAF INCSCYSHPI CLRHDIKSLG FPCGGYHGLF
LRDDVAEMEA VAQKFEQEDV ISKEIEQQAE NGDDLYSYPL SNLFQTDVED GYFPYCDISV
VLNPEIAAIS TTTGQPLEHI QPKMSHDTGN FRAELTDAFS SFAASTICSF VEQVGSSPKN
QVQGLANLGN TNGKGFSEEV SRNTYESSAS CLCREDCPGN HHGNVHEPES RSTVDQDSDG
SDSEIFRVKR RSFLKIEKRN ANDTMSSKNC EHQGLKRLKK LQHEGRCGQS TSSEGCRTDE
PSRNINSTSD CKEAPENAVK ERFGRGGALP ISIKYKKLGN EETMSRQREH QRYDRFHHEF
GKSTRETPPL EIGPKRLKVR GPTSLGSESR LD
//
