ID   A0A061GYL0_THECC        Unreviewed;       508 AA.
AC   A0A061GYL0;
DT   03-SEP-2014, integrated into UniProtKB/TrEMBL.
DT   03-SEP-2014, sequence version 1.
DT   27-MAR-2024, entry version 31.
DE   SubName: Full=RING/U-box superfamily protein isoform 1 {ECO:0000313|EMBL:EOY34337.1};
GN   ORFNames=TCM_042042 {ECO:0000313|EMBL:EOY34337.1};
OS   Theobroma cacao (Cacao) (Cocoa).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma.
OX   NCBI_TaxID=3641 {ECO:0000313|EMBL:EOY34337.1, ECO:0000313|Proteomes:UP000026915};
RN   [1] {ECO:0000313|EMBL:EOY34337.1, ECO:0000313|Proteomes:UP000026915}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Matina 1-6 {ECO:0000313|Proteomes:UP000026915};
RX   PubMed=23731509; DOI=10.1186/gb-2013-14-6-r53;
RA   Motamayor J.C., Mockaitis K., Schmutz J., Haiminen N., Iii D.L.,
RA   Cornejo O., Findley S.D., Zheng P., Utro F., Royaert S., Saski C.,
RA   Jenkins J., Podicheti R., Zhao M., Scheffler B.E., Stack J.C., Feltus F.A.,
RA   Mustiga G.M., Amores F., Phillips W., Marelli J.P., May G.D., Shapiro H.,
RA   Ma J., Bustamante C.D., Schnell R.J., Main D., Gilbert D., Parida L.,
RA   Kuhn D.N.;
RT   "The genome sequence of the most widely cultivated cacao type and its use
RT   to identify candidate genes regulating pod color.";
RL   Genome Biol. 14:R53.1-R53.24(2013).
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DR   EMBL; CM001887; EOY34337.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A061GYL0; -.
DR   EnsemblPlants; EOY34337; EOY34337; TCM_042042.
DR   Gramene; EOY34337; EOY34337; TCM_042042.
DR   HOGENOM; CLU_039981_1_0_1; -.
DR   Proteomes; UP000026915; Chromosome 9.
DR   GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR   GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR   CDD; cd16495; RING_CH-C4HC3_MARCH; 1.
DR   Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR   InterPro; IPR011016; Znf_RING-CH.
DR   InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR   PANTHER; PTHR46158; OS02G0165000 PROTEIN; 1.
DR   PANTHER; PTHR46158:SF1; RING_U-BOX SUPERFAMILY PROTEIN; 1.
DR   Pfam; PF12906; RINGv; 1.
DR   SMART; SM00744; RINGv; 1.
DR   SUPFAM; SSF57850; RING/U-box; 1.
DR   PROSITE; PS51292; ZF_RING_CH; 1.
PE   4: Predicted;
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Reference proteome {ECO:0000313|Proteomes:UP000026915};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM        380..397
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        409..430
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        436..458
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   DOMAIN          258..320
FT                   /note="RING-CH-type"
FT                   /evidence="ECO:0000259|PROSITE:PS51292"
FT   REGION          1..43
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          80..110
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          232..258
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          478..508
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        21..36
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        83..110
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        234..248
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   508 AA;  55395 MW;  054219D8718D92B2 CRC64;
     MGTEKKVVSG EHEVGGAASQ GTVSVPVQQV EDSTGITEET THAHHWKRSN LILEIPSRTL
     EDSSQESVVI KMPPAPSLTP RKVNFLLTPS PSDARISGSP GPSSSRGKSS LKSLLPKLSF
     KHRSINLDIE KAANFAPESS STSLREKPSI SRTLSLTKIF TPRINRTSSL PVTHIAQSNL
     ESAGSGSLGS SVNSSRKGNV LQISRSFSVP VNDKEGNLRR MDSFFRVVPS TPQVKEGEIS
     SSASLGPDDE NSDPDGEDIP EEEAVCRICM VELCEGGETL KMECSCKGEL ALAHKDCAVK
     WFTIKGNKTC DVCKQEVQNL PVTLLRIQSM RARNAGTSRG LQADVHGYRI WQEVPVLVIV
     SMLAYFCFLE QLLVGKMGTG AIAISLPFSC VLGLLSSMTS STMVNRRFVW VYASIQFALV
     VFFAHIFYSL VKVQAILSIL LATFSGFGVA MSGSSIVVEI LRWRRRWQAW SEEQHHSSQL
     LTRPPVQSPR AVNSPRRGPN VNQQNASS
//