ID A0A062VAJ6_9EURY Unreviewed; 863 AA.
AC A0A062VAJ6;
DT 03-SEP-2014, integrated into UniProtKB/TrEMBL.
DT 03-SEP-2014, sequence version 1.
DT 24-JAN-2024, entry version 30.
DE SubName: Full=ATP-dependent chaperone ClpB {ECO:0000313|EMBL:KCZ73513.1};
GN ORFNames=ANME2D_00581 {ECO:0000313|EMBL:KCZ73513.1};
OS Candidatus Methanoperedens nitroreducens.
OC Archaea; Euryarchaeota; Stenosarchaea group; Methanomicrobia;
OC Methanosarcinales; Candidatus Methanoperedenaceae;
OC Candidatus Methanoperedens.
OX NCBI_TaxID=1392998 {ECO:0000313|EMBL:KCZ73513.1, ECO:0000313|Proteomes:UP000027153};
RN [1] {ECO:0000313|EMBL:KCZ73513.1, ECO:0000313|Proteomes:UP000027153}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ANME-2d {ECO:0000313|EMBL:KCZ73513.1,
RC ECO:0000313|Proteomes:UP000027153};
RX PubMed=23892779; DOI=10.1038/nature12375;
RA Haroon M.F., Hu S., Shi Y., Imelfort M., Keller J., Hugenholtz P., Yuan Z.,
RA Tyson G.W.;
RT "Anaerobic oxidation of methane coupled to nitrate reduction in a novel
RT archaeal lineage.";
RL Nature 500:567-570(2013).
CC -!- SIMILARITY: Belongs to the ClpA/ClpB family.
CC {ECO:0000256|ARBA:ARBA00008675}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KCZ73513.1}.
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DR EMBL; JMIY01000001; KCZ73513.1; -; Genomic_DNA.
DR RefSeq; WP_048089013.1; NZ_JMIY01000001.1.
DR AlphaFoldDB; A0A062VAJ6; -.
DR PATRIC; fig|1392998.3.peg.189; -.
DR OrthoDB; 9837at2157; -.
DR Proteomes; UP000027153; Unassembled WGS sequence.
DR GO; GO:0005737; C:cytoplasm; IEA:InterPro.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0042026; P:protein refolding; IEA:InterPro.
DR GO; GO:0009408; P:response to heat; IEA:InterPro.
DR CDD; cd00009; AAA; 1.
DR CDD; cd19499; RecA-like_ClpB_Hsp104-like; 1.
DR Gene3D; 1.10.8.60; -; 1.
DR Gene3D; 1.10.1780.10; Clp, N-terminal domain; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 3.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR003959; ATPase_AAA_core.
DR InterPro; IPR017730; Chaperonin_ClpB.
DR InterPro; IPR019489; Clp_ATPase_C.
DR InterPro; IPR036628; Clp_N_dom_sf.
DR InterPro; IPR004176; Clp_R_dom.
DR InterPro; IPR001270; ClpA/B.
DR InterPro; IPR018368; ClpA/B_CS1.
DR InterPro; IPR028299; ClpA/B_CS2.
DR InterPro; IPR041546; ClpA/ClpB_AAA_lid.
DR InterPro; IPR027417; P-loop_NTPase.
DR NCBIfam; TIGR03346; chaperone_ClpB; 1.
DR PANTHER; PTHR11638; ATP-DEPENDENT CLP PROTEASE; 1.
DR PANTHER; PTHR11638:SF18; HEAT SHOCK PROTEIN 104; 1.
DR Pfam; PF00004; AAA; 1.
DR Pfam; PF07724; AAA_2; 1.
DR Pfam; PF17871; AAA_lid_9; 1.
DR Pfam; PF02861; Clp_N; 2.
DR Pfam; PF10431; ClpB_D2-small; 1.
DR PRINTS; PR00300; CLPPROTEASEA.
DR SMART; SM00382; AAA; 2.
DR SMART; SM01086; ClpB_D2-small; 1.
DR SUPFAM; SSF81923; Double Clp-N motif; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
DR PROSITE; PS51903; CLP_R; 1.
DR PROSITE; PS00870; CLPAB_1; 1.
DR PROSITE; PS00871; CLPAB_2; 1.
PE 3: Inferred from homology;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Chaperone {ECO:0000256|ARBA:ARBA00023186};
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000027153};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT DOMAIN 3..148
FT /note="Clp R"
FT /evidence="ECO:0000259|PROSITE:PS51903"
FT COILED 407..434
FT /evidence="ECO:0000256|SAM:Coils"
FT COILED 474..542
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 863 AA; 97785 MW; 126F96D740A43B61 CRC64;
MRFDRFTIKA QEALADAQSI VLDRNQQQLE VEHLLLALIN QKEGLTLQIL HKLGANVAGI
VSRLEEEIDR LPRVEGAGAG QTYITPRLNS VVEAAFKEMA NLRDEYLSTE HLLLAISDEK
NGISARIMRE NGASKDDIMK ALREIRGSSR VTDQTPEDKY QALKKYSRDL TELAERGKLD
PVIGRDNEIR RVLQVLSRRT KNNPVLIGEP GVGKTAIAEG LALRIFAGDV PETIKDKKVV
ALDMGALVAG TKFRGEFEER LKAVIKEIGD SEGKIILFID ELHTVVGAGA AEGAMDASNL
LKPALARGEL RCIGATTLNE YRKHIEKDPA LERRFQPVLI GEPTVEETIS ILRGLKERYE
IHHGVRIKDS ALIAAAMLSH RYITDRFLPD KAIDLIDEAA SKLRIEIDSM PSELDDIERK
IRQLEIERQA VKKEKDPYSK ERLLKIEKEL SDLRERSSSM KAHWQLEKDS IKNIRKIKED
IEKTRMASEK AELEGNLERA SELRYGVLIN LQKQLEAENR KLAELQEDQK MLKEEVDDED
IAEVVSNWTH IPVSKMLESE MQKLVHMEDR LRLRVVGQDE AVIAVSNAIR RGRAGLSDPR
RPTGSFMFLG PTGVGKTELG RALAEFMFDD EAAMIRLDMS EYMEKHTVAR LIGAPPGYVG
YEEGGQLTEA VRRRPYSVIL FDEIEKAHPD VFNLLLQILD DGRLTDGHGR TVDFKNTVII
MTSNIGSQWI FELLDRENEM RERVMEVVHS QFKPEFLNRL DEIIIFHSLK LPEIMKIVDI
QSGILSKRLD ERKISISLTE KAKDFIARTG YDPSYGARPL KRTIQHKILD PLSMKILNKE
FGEGDSIEVD VENNEIVFRR AGS
//